Evidence map›Paper›PMID 20862321›Full record

ArticlePLoS pathogens2010

A bistable switch and anatomical site control Vibrio cholerae virulence gene expression in the intestine.

Alex T Nielsen, Nadia A Dolganov, Thomas Rasmussen, Glen Otto, Michael C Miller, Stephen A Felt, Stéphanie Torreilles, Gary K Schoolnik

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed
6.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 113 citations in OpenAlex.

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  20. Mucolytic bacteria: prevalence in various pathological diseases.World journal of microbiology & biotechnology · 2021
    Review

12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Alex T NielsenDepartment of Microbiology and Immunology, Stanford University School of Medicine, Stanford, California, United States of America.
Nadia A Dolganov
Thomas Rasmussen
Glen Otto
Michael C Miller
Stephen A Felt
Stéphanie Torreilles
Gary K Schoolnik
Stanford University · USTechnical University of Denmark · DK

Funding

Vibrio Cholerae Colonization of Chitin SurfacesR01AI053706 · NIAID · STANFORD UNIVERSITY · PI SCHOOLNIK, GARY K · 2003 to 2007
$1.6M
NIAID NIH HHS AI053706NIAID NIH HHS R01 AI053706
6 · The paper itself

Abstract

A fundamental, but unanswered question in host-pathogen interactions is the timing, localization and population distribution of virulence gene expression during infection. Here, microarray and in situ single cell expression methods were used to study Vibrio cholerae growth and virulence gene expression during infection of the rabbit ligated ileal loop model of cholera. Genes encoding the toxin-coregulated pilus (TCP) and cholera toxin (CT) were powerfully expressed early in the infectious process in bacteria adjacent to epithelial surfaces. Increased growth was found to co-localize with virulence gene expression. Significant heterogeneity in the expression of tcpA, the repeating subunit of TCP, was observed late in the infectious process. The expression of tcpA, studied in single cells in a homogeneous medium, demonstrated unimodal induction of tcpA after addition of bicarbonate, a chemical inducer of virulence gene expression. Striking bifurcation of the population occurred during entry into stationary phase: one subpopulation continued to express tcpA, whereas the expression declined in the other subpopulation. ctxA, encoding the A subunit of CT, and toxT, encoding the proximal master regulator of virulence gene expression also exhibited the bifurcation phenotype. The bifurcation phenotype was found to be reversible, epigenetic and to persist after removal of bicarbonate, features consistent with bistable switches. The bistable switch requires the positive-feedback circuit controlling ToxT expression and formation of the CRP-cAMP complex during entry into stationary phase. Key features of this bistable switch also were demonstrated in vivo, where striking heterogeneity in tcpA expression was observed in luminal fluid in later stages of the infection. When this fluid was diluted into artificial seawater, bacterial aggregates continued to express tcpA for prolonged periods of time. The bistable control of virulence gene expression points to a mechanism that could generate a subpopulation of V. cholerae that continues to produce TCP and CT in the rice water stools of cholera patients.

Indexed as

Gene Expression Regulation, BacterialAnimalsBacterial ProteinsBiomarkersBlotting, WesternCholeraCholera ToxinFimbriae ProteinsFlow CytometryGene Expression ProfilingHost-Pathogen InteractionsHumansIntestinesOligonucleotide Array Sequence AnalysisRabbitsVibrio choleraeBacterial ProteinsBiomarkersCholera ToxinFimbriae ProteinsTcpA protein, Vibrio cholerae

Identifiers

PMID20862321
PMCPMC2940755
OpenAlexW2006341400

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.