Evidence map›Paper›PMID 20861442›Full record

ArticleJournal of neurophysiology2010

Spatiotemporal dynamics of rhythmic spinal interneurons measured with two-photon calcium imaging and coherence analysis.

Alex C Kwan, Shelby B Dietz, Guisheng Zhong, Ronald M Harris-Warrick, Watt W Webb

Abstract read
In one paragraph

Article in Journal of neurophysiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Optogenetic Activation of V1 Interneurons Reveals the Multimodality of Spinal Locomotor Networks in the Neonatal Mouse.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2021
    Article
  6. InterpretingNeurophotonics · 2020
    Review
  7. Article
  8. Article
  9. Article
  10. Delineating the Diversity of Spinal Interneurons in Locomotor Circuits.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2017
    Review
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Alex C KwanSchool of Applied and Engineering Physics, Cornell University, Ithaca, New York, USA. alexkwan@berkeley.edu
Shelby B Dietz
Guisheng Zhong
Ronald M Harris-Warrick
Watt W Webb

Funding

Biotechnology Resource Digital Electro-Optical ImagingP41EB001976 · NIBIB · CORNELL UNIVERSITY ITHACA · PI ZIPFEL, WARREN R · 2003 to 2010
$6.9M
Neurotransmitters, Neuromodulators and Motor SystemsR37NS017323 · NINDS · CORNELL UNIVERSITY · PI HARRIS-WARRICK, RONALD M · 2006 to 2012
$2.9M
The rodent central pattern generator for locomotionR01NS057599 · NINDS · CORNELL UNIVERSITY · PI HARRIS-WARRICK, RONALD M · 2009 to 2010
$692k
NIBIB NIH HHS 9-P41-EB-001976NIBIB NIH HHS P41 EB001976NINDS NIH HHS R01 NS057599NINDS NIH HHS R01-NS-057599NINDS NIH HHS R37 NS017323
6 · The paper itself

Abstract

In rhythmic neural circuits, a neuron often fires action potentials with a constant phase to the rhythm, a timing relationship that can be functionally significant. To characterize these phase preferences in a large-scale, cell type-specific manner, we adapted multitaper coherence analysis for two-photon calcium imaging. Analysis of simulated data showed that coherence is a simple and robust measure of rhythmicity for calcium imaging data. When applied to the neonatal mouse hindlimb spinal locomotor network, the phase relationships between peak activity of >1,000 ventral spinal interneurons and motor output were characterized. Most interneurons showed rhythmic activity that was coherent and in phase with the ipsilateral motor output during fictive locomotion. The phase distributions of two genetically identified classes of interneurons were distinct from the ensemble population and from each other. There was no obvious spatial clustering of interneurons with similar phase preferences. Together, these results suggest that cell type, not neighboring neuron activity, is a better indicator of an interneuron's response during fictive locomotion. The ability to measure the phase preferences of many neurons with cell type and spatial information should be widely applicable for studying other rhythmic neural circuits.

Indexed as

Action PotentialsAniline CompoundsAnimalsBiological ClocksCalciumCalcium SignalingDopamineFluorescent DyesFourier AnalysisGenes, ReporterHindlimbInterneuronsLac OperonLocomotionMiceMice, TransgenicAniline CompoundsCalciumDopamineFluo-3Fluorescent DyesN-MethylaspartateSerotoninXanthenes

Identifiers

PMID20861442
PMCPMC3007658

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.