Evidence map›Paper›PMID 20859256›Full record

ArticleThe EMBO journal2010

CBP/p300 double null cells reveal effect of coactivator level and diversity on CREB transactivation.

Lawryn H Kasper, Stephanie Lerach, Jianmin Wang, Song Wu, Trushar Jeevan, Paul K Brindle

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 70 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed, 1 pooled it
10.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

70 citing papers in PubMed, 1 synthesis or guideline pooled it, 107 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Epigenetic Control of Infant B Cell Precursor Acute Lymphoblastic Leukemia.International journal of molecular sciences · 2021
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Lawryn H KasperDepartment of Biochemistry, St Jude Children's Research Hospital, Memphis, TN 38105, USA.
Stephanie Lerach
Jianmin Wang
Song Wu
Trushar Jeevan
Paul K Brindle
St. Jude Children's Research Hospital · US

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 1985 to 2026
$166.9M
Analysis of craniofacial transcription factor and coactivator functional networksR21DE018183 · NIDCR · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI BRINDLE, PAUL K · 2008 to 2009
$462k
NCI NIH HHS P30 CA021765NIDCR NIH HHS DE018183NIDCR NIH HHS R21 DE018183
6 · The paper itself

Abstract

It remains uncertain how the DNA sequence of mammalian genes influences the transcriptional response to extracellular signals. Here, we show that the number of CREB-binding sites (CREs) affects whether the related histone acetyltransferases (HATs) CREB-binding protein (CBP) and p300 are required for endogenous gene transcription. Fibroblasts with both CBP and p300 knocked-out had strongly attenuated histone H4 acetylation at CREB-target genes in response to cyclic-AMP, yet transcription was not uniformly inhibited. Interestingly, dependence on CBP/p300 was often different between reporter plasmids and endogenous genes. Transcription in the absence of CBP/p300 correlated with endogenous genes having more CREs, more bound CREB, and more CRTC2 (a non-HAT coactivator of CREB). Indeed, CRTC2 rescued cAMP-inducible expression for certain genes in CBP/p300 null cells and contributed to the CBP/p300-independent expression of other targets. Thus, endogenous genes with a greater local concentration and diversity of coactivators tend to have more resilient-inducible expression. This model suggests how gene expression patterns could be tuned by altering coactivator availability rather than by changing signal input or transcription factor levels.

Indexed as

Transcription, GeneticAcetylationAnimalsBinding SitesBiomarkersBlotting, WesternCells, CulturedChromatin ImmunoprecipitationCREB-Binding ProteinCyclic AMPE1A-Associated p300 ProteinEmbryo, MammalianFibroblastsGene Expression ProfilingHistone AcetyltransferasesHistonesBiomarkersCREB-Binding ProteinCre recombinaseCrtc2 protein, mouseCyclic AMPE1A-Associated p300 ProteinEp300 protein, mouseHistone AcetyltransferasesHistonesIntegrasesRNA, MessengerRNA, Small InterferingTrans-ActivatorsTranscription Factors

Identifiers

PMID20859256
PMCPMC2982758
OpenAlexW2150959488

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.