Evidence map›Paper›PMID 20858414›Full record

ArticleBiophysical journal2010

Fluorescence anisotropy reveals order and disorder of protein domains in the nuclear pore complex.

Alexa L Mattheyses, Martin Kampmann, Claire E Atkinson, Sanford M Simon

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 63 citations in OpenAlex.

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  15. Spatio-angular fluorescence microscopy III. Constrained angular diffusion, polarized excitation, and high-NA imaging.Journal of the Optical Society of America. A, Optics, image science, and vision · 2020
    Article
  16. Review
  17. Kinetics of Histidine-Tagged Protein Association to Nickel-Decorated Liposome Surfaces.Langmuir : the ACS journal of surfaces and colloids · 2019
    Article
  18. Spatio-angular fluorescence microscopy I. Basic theory.Journal of the Optical Society of America. A, Optics, image science, and vision · 2019
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Alexa L MattheysesLaboratory of Cellular Biophysics, The Rockefeller University, New York, New York, USA.
Martin Kampmann
Claire E Atkinson
Sanford M Simon
Rockefeller University · US

Funding

Selective fluorescent labeling of proteins in living cellsR01GM087977 · NIGMS · ROCKEFELLER UNIVERSITY · PI SIMON, SANFORD M · 2009 to 2012
$1.6M
NIGMS NIH HHS R01 GM087977NIGMS NIH HHS R01GM087977
6 · The paper itself

Abstract

We present a new approach for studying individual protein domains within the nuclear pore complex (NPC) using fluorescence polarization microscopy. The NPC is a large macromolecular complex, the size and complexity of which presents experimental challenges. Using fluorescence anisotropy and exploiting the symmetry of the NPC and its organization in the nuclear envelope, we have resolved order and disorder of individual protein domains. Fluorescently tagging specific domains of individual nucleoporins revealed both rigid and flexible domains: the tips of the FG domains are disordered, whereas the NPC-anchored domains are ordered. Our technique allows the collection of structural information in vivo, providing the ability to probe the organization of protein domains within the NPC. This has particular relevance for the FG domain nucleoporins, which are crucial for nucleocytoplasmic transport.

Indexed as

Active Transport, Cell NucleusCytoplasmFluorescence PolarizationFluorescence Resonance Energy TransferFungal ProteinsNuclear EnvelopeNuclear Pore Complex ProteinsProtein Structure, TertiarySaccharomycetalesSubtraction TechniqueFungal ProteinsNuclear Pore Complex Proteins

Identifiers

PMID20858414
PMCPMC2941012
OpenAlexW2098186058

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.