Evidence map›Paper›PMID 20855529›Full record

ArticleMolecular and cellular biology2010

Cks1, Cdk1, and the 19S proteasome collaborate to regulate gene induction-dependent nucleosome eviction in yeast.

Susana Chaves, Chris Baskerville, Veronica Yu, Steven I Reed

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
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  14. Cdc28 kinase activity regulates the basal transcription machinery at a subset of genes.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  15. Similar temporal and spatial recruitment of native 19S and 20S proteasome subunits to transcriptionally active chromatin.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  16. Ubiquitin and proteasomes in transcription.Annual review of biochemistry · 2012
    Review
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Susana ChavesDepartment of Molecular Biology, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA.
Chris Baskerville
Veronica Yu
Steven I Reed
Scripps Research Institute · USUniversity of Minho · PT

Funding

CONTROL OF CELL DIVISION IN YEASTR37GM038328 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI REED, STEVEN I · 2000 to 2009
$4.3M
Medical Research Council MC_U120085813NIGMS NIH HHS R37 GM038328NIGMS NIH HHS R37 GM38328Wellcome Trust
6 · The paper itself

Abstract

Cks1, Cdk1 (Cdc28), and the proteasome are required for efficient transcriptional induction of GAL1 and other genes in Saccharomyces cerevisiae. We show here that one function of these proteins is to reduce nucleosome density on chromatin in a gene induction-specific manner. The transcriptional requirement for Cks1 can be bypassed if nucleosome density is reduced by an alternative pathway, indicating that this is the primary function of Cks1 in the context of gene induction. We further show that Cks1, Cdk1, and the 19S subunit of the proteasome are recruited to chromatin by binding directly to the histone H4 amino-terminal tail. However, this activity of the proteasome does not require the protease activity associated with the 20S subunit. These data suggest a model where binding of a complex consisting of Cks1, Cdk1, and the 19S proteasome to histone H4 leads to removal of nucleosomes via a nonproteolytic activity of the proteasome.

Indexed as

Gene Expression Regulation, FungalAdaptor Proteins, Signal TransducingCDC2 Protein KinaseCell Cycle ProteinsHistonesNucleosomesOpen Reading FramesProteasome Endopeptidase ComplexSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTranscriptional Activation26S proteasome non-ATPase regulatory subunit 13Adaptor Proteins, Signal TransducingCDC2 Protein KinaseCell Cycle ProteinsCKS1 protein, S cerevisiaeHistonesNucleosomesProteasome Endopeptidase ComplexSaccharomyces cerevisiae Proteins

Identifiers

PMID20855529
PMCPMC2976369
OpenAlexW2154469755

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.