Evidence map›Paper›PMID 20853134›Full record

ArticleJournal of neuro-oncology2011

KIT expression and methylation in medulloblastoma and PNET cell lines and tumors.

Mónica Enguita-Germán, Mikel Gurrea, Paula Schiapparelli, Thant S Zhu, Jessica G Crowley, Lisa L Hamm, Mark A Costello, Xiaobing He, Caroline E Talsma, Callie G Flack and 6 more

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of neuro-oncology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. KIT is a frequent target for epigenetic silencing in cutaneous melanoma.The Journal of investigative dermatology · 2015
    Article
  6. Article
  7. A contemporary review of molecular candidates for the development and treatment of childhood medulloblastoma.Child's nervous system : ChNS : official journal of the International Society for Pediatric Neurosurgery · 2013
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 2 countries.

Mónica Enguita-GermánBrain Tumor Biology Unit-CIFA, University of Navarra School of Sciences, Irunlarrea 1, 31008, Pamplona, Spain.
Mikel Gurrea
Paula Schiapparelli
Thant S Zhu
Jessica G Crowley
Lisa L Hamm
Mark A Costello
Xiaobing He
Caroline E Talsma
Callie G Flack
Shawn L Hervey-Jumper
Jason A Heth
Karin M Muraszko
Juan A Rey
Xing Fan
Javier S Castresana
University of Michigan–Ann Arbor · USUniversidad de Navarra · ESHospital Universitario La Paz · ES

Funding

Training Program in Tumor MicroenvironmentT32CA009676 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Maria G Castro, Analisa Virginia DiFeo · 1992 to 2026
$7.3M
6 · The paper itself

Abstract

The stem cell factor/kit tyrosine kinase receptor pathway is related to tumor growth and progression in several cancers including Ewing sarcoma, a peripheral PNET (pPNET). Identifying additional groups of tumors that may use the pathway is important as they might be responsive to imatinib mesylate treatment. MB and central PNET (cPNET) are embryonal tumors of the CNS that share similar undifferentiated morphology with Ewing sarcomas and display aggressive clinical behavior. cPNET outcome is significantly lower than MB outcome, even for localized tumors treated with high-risk MB therapy. The elucidation of signaling pathways involved in MB and cPNET pathogenesis, and the discovery of new therapeutic targets is necessary to improve the treatment of these neoplasms. We analyzed KIT expression in 2 MB, one pPNET, one cPNET and 2 rhabdomyosarcoma (RMS) cell lines. Also, in 13 tumor samples (12 MB and one cPNET), we found KIT overexpression in the most aggressive cell lines (metastatic MB and pPNET). Hypermethylation of KIT was clear in the RMS non-expressing cell lines. Among MB tumors, we could see variable levels of KIT expression; a subset of them (25%) might be related in its growth pattern to KIT up-regulation. No methylated KIT was detected in the tumors expressing the lowest levels of KIT. Our results point to methylation as an epigenetic regulatory mechanism for KIT inhibition only in the KIT non-expressing RMS cell lines, and neither in the rest of the cell lines nor in the tumor samples.

Indexed as

Blotting, WesternCell Line, TumorCerebellar NeoplasmsDNA MethylationEpigenesis, GeneticGene Expression Regulation, NeoplasticHumansMedulloblastomaNerve Sheath NeoplasmsProto-Oncogene Proteins c-kitReverse Transcriptase Polymerase Chain ReactionSignal TransductionProto-Oncogene Proteins c-kit

Identifiers

PMID20853134
OpenAlexW1971700256

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.