Evidence map›Paper›PMID 20851347›Full record

ArticleChemistry & biology2010

A general chemical method to regulate protein stability in the mammalian central nervous system.

Mari Iwamoto, Tomas Björklund, Cecilia Lundberg, Deniz Kirik, Thomas J Wandless

Abstract read
In one paragraph

Article in Chemistry & biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 238 papers.

0numbers the graph read from it
0cells of the map it votes in
238citing papers in PubMed
5.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

238 citing papers in PubMed, 401 citations in OpenAlex.

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178 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Mari IwamotoDepartment of Chemical and Systems Biology, Stanford University, CA 94305, USA.
Tomas Björklund
Cecilia Lundberg
Deniz Kirik
Thomas J Wandless
Lund University · SEStanford University · US

Funding

Conditional Protein TargetingR01GM068589 · NIGMS · STANFORD UNIVERSITY · PI WANDLESS, THOMAS JAMES · 2003 to 2010
$2.7M
NIGMS NIH HHS GM068589NIGMS NIH HHS R01 GM068589
6 · The paper itself

Abstract

The ability to make specific perturbations to biological molecules in a cell or organism is a central experimental strategy in modern research biology. We have developed a general technique in which the stability of a specific protein is regulated by a cell-permeable small molecule. Mutants of the Escherichia coli dihydrofolate reductase (ecDHFR) were engineered to be degraded, and, when this destabilizing domain is fused to a protein of interest, its instability is conferred to the fused protein resulting in rapid degradation of the entire fusion protein. A small-molecule ligand trimethoprim (TMP) stabilizes the destabilizing domain in a rapid, reversible, and dose-dependent manner, and protein levels in the absence of TMP are barely detectable. The ability of TMP to cross the blood-brain barrier enables the tunable regulation of proteins expressed in the mammalian central nervous system.

Indexed as

AnimalsBrainCell LineEscherichia coliFolic Acid AntagonistsLigandsMiceProtein EngineeringProtein StabilityProtein Structure, TertiaryRatsRecombinant Fusion ProteinsTacrolimus Binding ProteinsTetrahydrofolate DehydrogenaseTrimethoprimFolic Acid AntagonistsLigandsRecombinant Fusion ProteinsTacrolimus Binding ProteinsTetrahydrofolate DehydrogenaseTrimethoprim

Identifiers

PMID20851347
PMCPMC2943492
OpenAlexW2105582260

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.