Evidence map›Paper›PMID 20848535›Full record

ArticleInflammatory bowel diseases2011

Distinct IFNG methylation in a subset of ulcerative colitis patients based on reactivity to microbial antigens.

Rivkah Gonsky, Richard L Deem, Carol J Landers, Carrie A Derkowski, Dror Berel, Dermot P B McGovern, Stephan R Targan

Open access · bronzeAbstract read
In one paragraph

Article in Inflammatory bowel diseases, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 32 citations in OpenAlex.

  1. Mucosal Responses to Type II Interferon in IBD.Inflammatory bowel diseases · 2025
    Article
  2. Article
  3. Celiac disease: From genetics to epigenetics.World journal of gastroenterology · 2022
    Review
  4. Review
  5. Epigenetic Regulations of AhR in the Aspect of Immunomodulation.International journal of molecular sciences · 2020
    Review
  6. Review
  7. Article
  8. Novel biomarkers of fibrosis in Crohn's disease.World journal of gastrointestinal pathophysiology · 2016
    Review
  9. Review
  10. Article
  11. Review
  12. Article
  13. Review
  14. DNA methylation in inflammatory bowel disease and beyond.World journal of gastroenterology · 2013
    Review
  15. Article
  16. Article
  17. Article
  18. Epigenetics and the developmental origins of inflammatory bowel diseases.Canadian journal of gastroenterology = Journal canadien de gastroenterologie · 2012
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Rivkah GonskyInflammatory Bowel and Immunobiology Research Institute, Cedars-Sinai Medical Center, Los Angeles, California 90048, USA.
Richard L Deem
Carol J Landers
Carrie A Derkowski
Dror Berel
Dermot P B McGovern
Stephan R Targan
Cedars-Sinai Medical Center · US

Funding

Using polygenic scores to enhance both variant discovery, and understanding of functional consequences of genetic variation in IBD.P01DK046763 · NIDDK · CEDARS-SINAI MEDICAL CENTER · PI TARGAN, STEPHAN R. · 1992 to 2020
$31.1M
IBD: Mucosa Specific Regulation of IFN-gamma ProductionR37DK043211 · NIDDK · CEDARS-SINAI MEDICAL CENTER · PI TARGAN, STEPHAN R. · 2006 to 2015
$3.6M
ROLE OF ACTIVATED T CELLS IN GUT INJURYR01DK043211 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI TARGAN, STEPHAN R. · 1991 to 2005
$1.8M
NIDDK NIH HHS P01 DK046763NIDDK NIH HHS R01 DK043211NIDDK NIH HHS R37 DK043211
6 · The paper itself

Abstract

backgroundHigh antibody reactivity toward microbial antigens in Crohn's disease (CD) patients is predictive of a more aggressive disease course. However, few ulcerative colitis (UC) patients exhibit serologic reactivity toward microbial antigens. Mucosal expression of IFN-γ plays a pivotal role in inflammatory bowel disease (IBD) pathogenesis. Recent genome-wide association studies (GWAS) surprisingly link UC, but not CD, risk loci to IFNG. We recently demonstrated that mucosal T cells from IBD patients exhibit distinct patterns of IFNG methylation compared to controls. This study evaluated the relationship between IFNG methylation and serologic and clinical profiles in peripheral T cells from IBD patients.

methodsDNA from peripheral T cells of 163 IBD patients (91 CD and 64 UC) and 42 controls was analyzed for methylation of eight IFNG sites. Serum markers ASCA, OmpC, I2, CBir, and pANCA were measured by enzyme-linked immunosorbent assay (ELISA). IFN-γ secretion was measured by ELISA.

resultsIBD patients requiring surgery exhibited reduced IFNG methylation compared to nonsurgical patients (P < 0.02). Enhancement of IFN-γ secretion (P < 0.003), along with high antibody responses toward multiple microbial antigens (P < 0.017) in UC, but not CD, patients was correlated with decreased IFNG methylation. pANCA levels were not correlated with IFNG methylation.

conclusionsLevels of IFNG methylation were correlated with immune response to microbial components and expression of IFN-γ in UC patients. Serological and epigenetic markers identify a subset of UC patients with an expression profile of a key TH1 pathogenic cytokine. These data may provide a useful tool to classify a more homogeneous subset of UC patients, allowing for improved diagnostics and targeted therapeutics.

Indexed as

DNA MethylationAdolescentAdultAgedAged, 80 and overAntibodies, Antineutrophil CytoplasmicAntigens, BacterialColitis, UlcerativeCrohn DiseaseEnzyme-Linked Immunosorbent AssayFemaleHumansInterferon-gammaMaleMiddle AgedPromoter Regions, GeneticAntibodies, Antineutrophil CytoplasmicAntigens, BacterialInterferon-gamma

Identifiers

PMID20848535
PMCPMC3400263
OpenAlexW2059471082

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.