Evidence map›Paper›PMID 20847274›Full record

ArticleScience (New York, N.Y.)2010

Differential arginylation of actin isoforms is regulated by coding sequence-dependent degradation.

Fangliang Zhang, Sougata Saha, Svetlana A Shabalina, Anna Kashina

Abstract read
In one paragraph

Article in Science (New York, N.Y.), 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 126 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
126citing papers in PubMed, 2 pooled it
7.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

126 citing papers in PubMed, 2 syntheses or guidelines pooled it, 205 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. The regulation, function and disease relevance of cytoplasmic tRNAs.Nature reviews. Molecular cell biology · 2026
    Review
  4. Review
  5. Article
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  13. Review
  14. Impact of Protein NLife (Basel, Switzerland) · 2023
    Review
  15. Article
  16. Article
  17. Article
  18. Assaying Arginylation Activity in Cell Lysates Using a Fluorescent Reporter.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  19. Protein Arginylation: Milestones of Discovery.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  20. Article

66 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Fangliang ZhangDepartment of Animal Biology, School of Veterinary Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Sougata Saha
Svetlana A Shabalina
Anna Kashina
University of Pennsylvania · USNational Center for Biotechnology Information · US

Funding

Role of Protein Arginylation in Cardiovascular DevelopmentR01HL084419 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI KASHINA, ANNA S · 2007 to 2011
$2.2M
Intramural NIH HHSNHLBI NIH HHS 5R01HL084419NHLBI NIH HHS R01 HL084419
6 · The paper itself

Abstract

The mammalian cytoskeletal proteins β- and γ-actin are highly homologous, but only β-actin is amino-terminally arginylated in vivo, which regulates its function. We examined the metabolic fate of exogenously expressed arginylated and nonarginylated actin isoforms. Arginylated γ-actin, unlike β-, was highly unstable and was selectively ubiquitinated and degraded in vivo. This instability was regulated by the differences in the nucleotide coding sequence between the two actin isoforms, which conferred different translation rates. γ-actin was translated more slowly than β-actin, and this slower processing resulted in the exposure of a normally hidden lysine residue for ubiquitination, leading to the preferential degradation of γ-actin upon arginylation. This degradation mechanism, coupled to nucleotide coding sequence, may regulate protein arginylation in vivo.

Indexed as

CodonProtein Modification, TranslationalActinsAmino Acid SequenceAnimalsArginineCell LineCell Line, TumorHumansLysineMiceNucleic Acid ConformationProteasome Endopeptidase ComplexProtein BiosynthesisProtein FoldingProtein IsoformsActinsArginineCodonLysineProteasome Endopeptidase ComplexProtein IsoformsRecombinant Fusion ProteinsRNA, Messenger

Identifiers

PMID20847274
PMCPMC2941909
OpenAlexW2035557248

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.