Evidence map›Paper›PMID 20841786›Full record

ArticleStudies in health technology and informatics2010

Exploiting UMLS semantics for checking semantic consistency among UMLS concepts.

Halit Erdogan, Esra Erdem, Olivier Bodenreider

Abstract read
In one paragraph

Article in Studies in health technology and informatics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. A review of auditing techniques for the Unified Medical Language System.Journal of the American Medical Informatics Association : JAMIA · 2020
    Review
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Halit ErdoganFaculty of Engineering and Natural Sciences, Sabancı University, Turkey.
Esra Erdem
Olivier Bodenreider

Funding

National Biomedical Information ServicesZIHLM200888 · NLM · NATIONAL LIBRARY OF MEDICINE · PI PALTOO, DINA · 2009 to 2025
$5200.7M
Intramural NIH HHS Z99 LM999999
6 · The paper itself

Abstract

objectivesTo quantify semantic inconsistency in UMLS concepts from the perspective of their hierarchical relations and to show through examples how semantically-inconsistent concepts can help reveal erroneous synonymy relations.

methodsInconsistency is defined in reference to concepts from the UMLS Metathesaurus. Consistency is evaluated by comparing the semantic groups of the two concepts in each pair of hierarchically-related concepts. A limited number of inconsistent concepts was inspected manually.

results81,512 concepts are inconsistent due to the differences in semantic groups between a concept and its parent. Four examples of wrong synonymy are presented.

conclusionsA vast majority of inconsistent hierarchical relations are not indicative of any errors. We discovered an interesting semantic pattern along hierarchies, which seems associated with wrong synonymy.

Indexed as

Artificial IntelligenceNatural Language ProcessingSemanticsTerminology as TopicUnified Medical Language SystemData MiningTurkey

Identifiers

PMID20841786
PMCPMC4303374

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.