ArticleBMC plant biology2010
Candidate genes associated with bud dormancy release in blackcurrant (Ribes nigrum L.).
Article in BMC plant biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.
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Who cites it
29 citing papers in PubMed.
- A full genome assembly reveals drought stress effects on gene expression and metabolite profiles in blackcurrant (Horticulture research · 2025Article
- Chilling or chemical induction of dormancy release in blackcurrant (Ribes nigrum) buds is associated with characteristic shifts in metabolite profiles.The Biochemical journal · 2024Article
- Temporal transcriptome and metabolite analyses provide insights into the biochemical and physiological processes underlying endodormancy release in pistachio (Frontiers in plant science · 2023Article
- The Perennial Clock Is an Essential Timer for Seasonal Growth Events and Cold Hardiness.Methods in molecular biology (Clifton, N.J.) · 2022Article
- Chilling Requirement Validation and Physiological and Molecular Responses of the Bud Endodormancy Release inInternational journal of molecular sciences · 2021Article
- Genomic signatures of natural selection at phenology-related genes in a widely distributed tree species Fagus sylvatica L.BMC genomics · 2021Article
- Comparative transcriptome analysis provides insight into regulation pathways and temporal and spatial expression characteristics of grapevine (Vitis vinifera) dormant buds in different nodes.BMC plant biology · 2020Article
- How fall dormancy benefits alfalfa winter-survival? Physiologic and transcriptomic analyses of dormancy process.BMC plant biology · 2019Article
- MADS-Box Genes Are Key Components of Genetic Regulatory Networks Involved in Abiotic Stress and Plastic Developmental Responses in Plants.Frontiers in plant science · 2019Review
- Gene expression analysis of bud burst process in European hazelnut (Physiology and molecular biology of plants : an international journal of functional plant biology · 2019Article
- Cold Hardiness in Trees: A Mini-Review.Frontiers in plant science · 2018Review
- A Transcript and Metabolite Atlas of Blackcurrant Fruit Development Highlights Hormonal Regulation and Reveals the Role of Key Transcription Factors.Frontiers in plant science · 2018Article
- Comparative RNA-seq based transcriptomic analysis of bud dormancy in grape.BMC plant biology · 2017Article
- Genome-Wide Association Mapping of Flowering and Ripening Periods in Apple.Frontiers in plant science · 2017Article
- Article
- Winter warming delays dormancy release, advances budburst, alters carbohydrate metabolism and reduces yield in a temperate shrub.AoB PLANTS · 2015Article
- Transcriptomic analysis of American ginseng seeds during the dormancy release process by RNA-Seq.PloS one · 2015Article
- Mapping of Candidate Genes Involved in Bud Dormancy and Flowering Time in Sweet Cherry (Prunus avium).PloS one · 2015Article
- Differential expression of microRNAs in dormant bud of tea [Camellia sinensis (L.) O. Kuntze].Plant cell reports · 2014Article
- Epigenetic regulation of bud dormancy events in perennial plants.Frontiers in plant science · 2014Review
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Authors and funding
8 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundThe detrimental effects of mild winter temperatures on the consistency of cropping of blackcurrant (Ribes nigrum L.) in parts of Europe have led to increasing interest in the genetic control of dormancy release in this species. This study examined patterns of gene expression in leaf buds of blackcurrant to identify key differential changes in these profiles around the time of budbreak.
resultsUsing leaf bud tissue of blackcurrant, a cDNA library was generated as a source of blackcurrant ESTs for construction of a custom microarray, which was used to identify differential gene expression during dormancy release. Gene activity was lowest in early stages of dormancy, increasing to reach a maximum around the time of budbreak. Genes with significantly changing expression profiles were clustered and evidence is provided for the transient activity of genes previously associated with dormancy processes in other species. Expression profiling identified candidate genes which were mapped onto a blackcurrant genetic linkage map containing budbreak-related QTL. Three genes, which putatively encode calmodulin-binding protein, beta tubulin and acetyl CoA carboxylase respectively, were found to co-localise with budbreak QTL.
conclusionsThis study provides insight into the genetic control of dormancy transition in blackcurrant, identifying key changes in gene expression around budbreak. Genetic mapping of ESTs enabled the identification of genes which co-localise with previously-characterised blackcurrant QTL, and it is concluded that these genes have probable roles in release of dormancy and can therefore provide a basis for the development of genetic markers for future breeding deployment.
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