Evidence map›Paper›PMID 20837482›Full record

ArticleThe Journal of biological chemistry2010

Structural and functional characterization of the C-terminal transmembrane region of NBCe1-A.

Quansheng Zhu, Liyo Kao, Rustam Azimov, Natalia Abuladze, Debra Newman, Alexander Pushkin, Weixin Liu, Connie Chang, Ira Kurtz

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. The role of NaPflugers Archiv : European journal of physiology · 2024
    Review
  2. Review
  3. Article
  4. A novel mutant NaThe Journal of physiology · 2016
    Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Cation-coupled bicarbonate transporters.Comprehensive Physiology · 2014
    Review
  10. Review
  11. Review
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. SLC4A transporters.Current topics in membranes · 2012
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Quansheng ZhuDivision of Nephrology, David Geffen School of Medicine, UCLA, Los Angeles, California 90095-1689, USA.
Liyo Kao
Rustam Azimov
Natalia Abuladze
Debra Newman
Alexander Pushkin
Weixin Liu
Connie Chang
Ira Kurtz

Funding

The Biology of NBCe1 in Health and DiseaseR01DK077162 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI IRA KURTZ · 2007 to 2026
$6.7M
BIOLOGY OF SODIUM BICARBONATE TRANSPORTR01DK058563 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI KURTZ, IRA · 2001 to 2011
$3.1M
NIDDK NIH HHS DK058563NIDDK NIH HHS DK077162NIDDK NIH HHS R01 DK058563NIDDK NIH HHS R01 DK077162
6 · The paper itself

Abstract

NBCe1-A and AE1 both belong to the SLC4 HCO(3)(-) transporter family. The two transporters share 40% sequence homology in the C-terminal transmembrane region. In this study, we performed extensive substituted cysteine-scanning mutagenesis analysis of the C-terminal region of NBCe1-A covering amino acids Ala(800)-Lys(967). Location of the introduced cysteines was determined by whole cell labeling with a membrane-permeant biotin maleimide and a membrane-impermeant 2-((5(6)-tetramethylrhodamine)carboxylamino) ethyl methanethiosulfonate (MTS-TAMRA) cysteine-reactive reagent. The results show that the extracellular surface of the NBCe1-A C-terminal transmembrane region is minimally exposed to aqueous media with Met(858) accessible to both biotin maleimide and TAMRA and Thr(926)-Ala(929) only to TAMRA labeling. The intracellular surface contains a highly exposed (Met(813)-Gly(828)) region and a cryptic (Met(887)-Arg(904)) connecting loop. The lipid/aqueous interface of the last transmembrane segment is at Asp(960). Our data clearly determined that the C terminus of NBCe1-A contains 5 transmembrane segments with greater average size compared with AE1. Functional assays revealed only two residues in the region of Pro(868)-Leu(967) (a functionally important region in AE1) that are highly sensitive to cysteine substitution. Our findings suggest that the C-terminal transmembrane region of NBCe1-A is tightly folded with unique structural and functional features that differ from AE1.

Indexed as

Amino Acid SequenceAmino Acid SubstitutionAnion Exchange Protein 1, ErythrocyteHEK293 CellsHumansMolecular Sequence DataProtein FoldingProtein Structure, SecondaryProtein Structure, TertiaryProtein TransportSodium-Bicarbonate SymportersAnion Exchange Protein 1, ErythrocyteSLC4A4 protein, humanSodium-Bicarbonate Symporters

Identifiers

PMID20837482
PMCPMC2988324

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.