Evidence map›Paper›PMID 20833787›Full record

ArticleApplied and environmental microbiology2010

Differences in methylation at GATC sites in genomic DNA of Campylobacter coli from turkeys and swine.

Sandra Wright, Simone Wilson, William G Miller, Robert E Mandrell, Robin M Siletzky, Sophia Kathariou

Open access · greenAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Sandra WrightNorth Carolina State University, Department of Food Science, 339 Schaub Hall, Raleigh, NC 27695, USA.
Simone Wilson
William G Miller
Robert E Mandrell
Robin M Siletzky
Sophia Kathariou
North Carolina State University · USWestern Regional Research Center · USSaint Augustine's University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A significant fraction (46/108, 43%) of swine isolates of Campylobacter coli but none of 81 isolates of C. coli from turkeys had genomic DNA that was resistant to digestion by MboI, suggesting methylation of adenines at GATC sites. No consistent association was noted between antimicrobial resistance and MboI resistance. Seven swine-associated multilocus sequence typing-based sequence types (STs) were detected among multiple isolates with MboI-resistant DNA. The data suggest host-associated DNA modification system(s) specific for adenine at GATC sites in C. coli from swine.

Indexed as

AnimalsAnti-Bacterial AgentsCampylobacter coliCampylobacter InfectionsDeoxyribonucleases, Type II Site-SpecificDNA, BacterialDNA MethylationDrug Resistance, MicrobialPoultry DiseasesSwineSwine DiseasesTurkeysAnti-Bacterial AgentsDeoxyribonucleases, Type II Site-SpecificDNA, BacterialGATC-specific type II deoxyribonucleases

Identifiers

PMID20833787
PMCPMC2976269
OpenAlexW2124594153

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.