Evidence map›Paper›PMID 20833722›Full record

ArticleThe Journal of biological chemistry2010

Identification of anhydrobiosis-related genes from an expressed sequence tag database in the cryptobiotic midge Polypedilum vanderplanki (Diptera; Chironomidae).

Richard Cornette, Yasushi Kanamori, Masahiko Watanabe, Yuichi Nakahara, Oleg Gusev, Kanako Mitsumasu, Keiko Kadono-Okuda, Michihiko Shimomura, Kazuei Mita, Takahiro Kikawada and 1 more

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Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

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24citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

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  3. Molecular Mechanisms ofPlants (Basel, Switzerland) · 2025
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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

11 authors.

Richard CornetteNational Institute of Agrobiological Sciences, 1-2 Ohwashi, Tsukuba, Ibaraki 305-8634, Japan.
Yasushi Kanamori
Masahiko Watanabe
Yuichi Nakahara
Oleg Gusev
Kanako Mitsumasu
Keiko Kadono-Okuda
Michihiko Shimomura
Kazuei Mita
Takahiro Kikawada
Takashi Okuda

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Some organisms are able to survive the loss of almost all their body water content, entering a latent state known as anhydrobiosis. The sleeping chironomid (Polypedilum vanderplanki) lives in the semi-arid regions of Africa, and its larvae can survive desiccation in an anhydrobiotic form during the dry season. To unveil the molecular mechanisms of this resistance to desiccation, an anhydrobiosis-related Expressed Sequence Tag (EST) database was obtained from the sequences of three cDNA libraries constructed from P. vanderplanki larvae after 0, 12, and 36 h of desiccation. The database contained 15,056 ESTs distributed into 4,807 UniGene clusters. ESTs were classified according to gene ontology categories, and putative expression patterns were deduced for all clusters on the basis of the number of clones in each library; expression patterns were confirmed by real-time PCR for selected genes. Among up-regulated genes, antioxidants, late embryogenesis abundant (LEA) proteins, and heat shock proteins (Hsps) were identified as important groups for anhydrobiosis. Genes related to trehalose metabolism and various transporters were also strongly induced by desiccation. Those results suggest that the oxidative stress response plays a central role in successful anhydrobiosis. Similarly, protein denaturation and aggregation may be prevented by marked up-regulation of Hsps and the anhydrobiosis-specific LEA proteins. A third major feature is the predicted increase in trehalose synthesis and in the expression of various transporter proteins allowing the distribution of trehalose and other solutes to all tissues.

Indexed as

Expressed Sequence TagsAnimalsChironomidaeCluster AnalysisDatabases, GeneticDehydrationGene Expression ProfilingGene LibraryGenes, InsectInsect ProteinsLarvaMolecular Sequence DataReverse Transcriptase Polymerase Chain ReactionTime FactorsInsect Proteins

Identifiers

PMID20833722
PMCPMC2975212

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.