Evidence map›Paper›PMID 20833710›Full record

ArticleThe Journal of biological chemistry2010

Contribution of lysine 11-linked ubiquitination to MIR2-mediated major histocompatibility complex class I internalization.

Eiji Goto, Yuko Yamanaka, Akiyo Ishikawa, Masami Aoki-Kawasumi, Mari Mito-Yoshida, Mari Ohmura-Hoshino, Yohei Matsuki, Mizuho Kajikawa, Hisashi Hirano, Satoshi Ishido

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 67 citations in OpenAlex.

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  14. Neddylation E2 UBE2F Promotes the Survival of Lung Cancer Cells by Activating CRL5 to Degrade NOXA via the K11 Linkage.Clinical cancer research : an official journal of the American Association for Cancer Research · 2017
    Article
  15. Article
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  17. Ubiquitin modifications.Cell research · 2016
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Eiji GotoLaboratory for Infectious Immunity, RIKEN Research Center for Allergy and Immunology, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan.
Yuko Yamanaka
Akiyo Ishikawa
Masami Aoki-Kawasumi
Mari Mito-Yoshida
Mari Ohmura-Hoshino
Yohei Matsuki
Mizuho Kajikawa
Hisashi Hirano
Satoshi Ishido
RIKEN Center for Integrative Medical Sciences · JPYokohama City University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The polyubiquitin chain is generated by the sequential addition of ubiquitin moieties to target molecules, a reaction between specific lysine residues that is catalyzed by E3 ubiquitin ligase. The Lys(48)-linked and Lys(63)-linked polyubiquitin chains are well established inducers of proteasome-dependent degradation and signal transduction, respectively. The concept has recently emerged that polyubiquitin chain-mediated regulation is even more complex because various types of atypical polyubiquitin chains have been discovered in vivo. Here, we demonstrate that a novel complex ubiquitin chain functions as an internalization signal for major histocompatibility complex class I (MHC I) membrane proteins in vivo. Using a tetracycline-inducible expression system and quantitative mass spectrometry, we show that the polyubiquitin chain generated by the viral E3 ubiquitin ligase of Kaposi sarcoma-associated herpesvirus, MIR2, is a Lys(11) and Lys(63) mixed-linkage chain. This novel ubiquitin chain can function as an internalization signal for MHC I through its association with epsin1, an adaptor molecule containing ubiquitin-interacting motifs.

Indexed as

EndocytosisAdaptor Proteins, Vesicular TransportBlotting, WesternCD8 AntigensClathrinFlow CytometryGreen Fluorescent ProteinsHeLa CellsHistocompatibility Antigens Class IHumansImmediate-Early ProteinsLysineMass SpectrometryMicroscopy, FluorescenceRNA InterferenceUbiquitinationAdaptor Proteins, Vesicular TransportCD8 AntigensClathrinepsinGreen Fluorescent ProteinsHistocompatibility Antigens Class IImmediate-Early ProteinsK5 protein, Human herpesvirus 8LysineUbiquitinsViral Proteins

Identifiers

PMID20833710
PMCPMC2975155
OpenAlexW2016235886

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.