Evidence map›Paper›PMID 20833098›Full record

ReviewTrends in plant science2011

PIFs: pivotal components in a cellular signaling hub.

Pablo Leivar, Peter H Quail

Abstract readReview
In one paragraph

Review in Trends in plant science, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 508 papers.

0numbers the graph read from it
0cells of the map it votes in
508citing papers in PubMed
61.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

508 citing papers in PubMed, 951 citations in OpenAlex.

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448 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 2 countries.

Pablo LeivarDepartment of Plant and Microbial Biology, University of California, Berkeley, CA 94720, USA.
Peter H Quail
University of California, Berkeley · US

Funding

PHYTOCHROME--BIOGENESIS AND MOLECULAR PROPERTIESR01GM047475 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI QUAIL, PETER H. · 1992 to 2018
$6.5M
NIGMS NIH HHS GM-47475NIGMS NIH HHS R01 GM047475
6 · The paper itself

Abstract

A small subset of basic helix-loop-helix transcription factors called PIFs (phytochrome-interacting factors) act to repress seed germination, promote seedling skotomorphogenesis and promote shade-avoidance through regulated expression of over a thousand genes. Light-activated phytochrome molecules directly reverse these activities by inducing rapid degradation of the PIF proteins. Here, we review recent advances in dissecting this signaling pathway and examine emerging evidence that indicates that other pathways also converge to regulate PIF activity, including the gibberellin pathway, the circadian clock and high temperature. Thus PIFs have broader roles than previously appreciated, functioning as a cellular signaling hub that integrates multiple signals to orchestrate regulation of the transcriptional network that drives multiple facets of downstream morphogenesis. The relative contributions of the individual PIFs to this spectrum of regulatory functions ranges from quantitatively redundant to qualitatively distinct.

Indexed as

Signal TransductionArabidopsisArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsCircadian RhythmGibberellinsPhytochromeTemperatureArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsGibberellinsPhytochrome

Identifiers

PMID20833098
PMCPMC3019249
OpenAlexW2155574851

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.