Evidence map›Paper›PMID 20833065›Full record

ReviewSeminars in immunology2010

Epigenetic and 3-dimensional regulation of V(D)J rearrangement of immunoglobulin genes.

Stephanie C Degner-Leisso, Ann J Feeney

Open access · greenAbstract readReview
In one paragraph

Review in Seminars in immunology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Review
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  8. Article
  9. The ageing human B cell repertoire: a failure of selection?Clinical and experimental immunology · 2016
    Review
  10. Setd1a regulates progenitor B-cell-to-precursor B-cell development through histone H3 lysine 4 trimethylation and Ig heavy-chain rearrangement.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2015
    Article
  11. CTCF-binding elements 1 and 2 in the Igh intergenic control region cooperatively regulate V(D)J recombination.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  12. Article
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  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Stephanie C Degner-LeissoThe Scripps Research Institute, Department of Immunology and Microbial Science, IMM-22, 10550 North Torrey Pines Road, La Jolla, CA 92037, United States.
Ann J Feeney
Scripps Research Institute · US

Funding

JUNCTIONAL DIVERSITY IN B AND T CELLSR01AI029672 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI FEENEY, ANN J · 1991 to 2009
$3.4M
Role of CTCF and Cohesin in V(D)J RearrangementR01AI082918 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI FEENEY, ANN J · 2010 to 2014
$2.4M
Control of Accessibility for V(D) J RecombinationR01AI052313 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI FEENEY, ANN J · 2002 to 2006
$1.7M
Role of CTCF in V(D)J RearrangementF32AI084418 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI LEISSO, STEPHANIE CHRISTINE · 2009 to 2010
$69k
NIAID NIH HHS AI052313NIAID NIH HHS AI082918NIAID NIH HHS F32 AI084418NIAID NIH HHS R01 AI029672NIAID NIH HHS R01 AI052313NIAID NIH HHS R01 AI082918
6 · The paper itself

Abstract

V(D)J recombination is a crucial component of the adaptive immune response, allowing for the production of a diverse antigen receptor repertoire (Ig and TCR). This review will focus on how epigenetic regulation and 3-dimensional (3D) interactions may control V(D)J recombination at Ig loci. The interplay between transcription factors and post-translational modifications at the Igh, Igκ, and Igλ loci will be highlighted. Furthermore, we propose that the spatial organization and epigenetic boundaries of each Ig loci before and during V(D)J recombination may be influenced in part by the CTCF/cohesin complex. Taken together, the many epigenetic and 3D layers of control ensure that Ig loci are only rearranged at appropriate stages of B cell development.

Indexed as

EpigenomicsGene Rearrangement, B-LymphocyteGenes, ImmunoglobulinAnimalsB-LymphocytesEnhancer Elements, GeneticHumans

Identifiers

PMID20833065
PMCPMC2981695
OpenAlexW2077118908

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.