ArticleMolecular imaging and biology2011
Articulated whole-body atlases for small animal image analysis: construction and applications.
Article in Molecular imaging and biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.
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Who cites it
22 citing papers in PubMed.
- A preclinical CT and MRI Liver Imaging Dataset with Anatomical, Functional and Segmentation Data.Scientific data · 2026Article
- Laser-Ablated Gold Nanoparticles as Tunable Contrast Agents for Preclinical Imaging.Nanomaterials (Basel, Switzerland) · 2025Article
- Robust Automated Mouse Micro-CT Segmentation Using Swin UNEt TRansformers.Bioengineering (Basel, Switzerland) · 2024Article
- Optimizing SUV Analysis: A Multicenter Study on Preclinical FDG-PET/CT Highlights the Impact of Standardization.Molecular imaging and biology · 2024Observational
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- A three-dimensional virtual mouse generates synthetic training data for behavioral analysis.Nature methods · 2021Article
- Small animal PET: a review of what we have done and where we are going.Physics in medicine and biology · 2020Review
- Deep learning-enabled multi-organ segmentation in whole-body mouse scans.Nature communications · 2020Article
- Spatial agreement of demineralized areas in quantitative light-induced fluorescence images and digital photographs.Dento maxillo facial radiology · 2018Article
- Automated quantification of bioluminescence images.Nature communications · 2018Article
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- Multimodal Correlative Preclinical Whole Body Imaging and Segmentation.Scientific reports · 2016Article
- A deformable atlas of the laboratory mouse.Molecular imaging and biology · 2015Article
- Article
- A method of 2D/3D registration of a statistical mouse atlas with a planar X-ray projection and an optical photo.Medical image analysis · 2013Article
- Mathematical Models of Blast-Induced TBI: Current Status, Challenges, and Prospects.Frontiers in neurology · 2013Article
- MARS: a mouse atlas registration system based on a planar x-ray projector and an optical camera.Physics in medicine and biology · 2012Article
- Mouse atlas registration with non-tomographic imaging modalities-a pilot study based on simulation.Molecular imaging and biology · 2012Article
- Quantitative analysis of tumor burden in mouse lung via MRI.Magnetic resonance in medicine · 2012Article
- Article
Corrections and comments
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Authors and funding
6 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
purposeUsing three publicly available small-animal atlases (Sprague-Dawley rat, MOBY, and Digimouse), we built three articulated atlases and present several applications in the scope of molecular imaging. PROCEDURES: Major bones/bone groups were manually segmented for each atlas skeleton. Then, a kinematic model for each atlas was built: each joint position was identified and the corresponding degrees of freedom were specified.
resultsThe articulated atlases enable automated registration into a common coordinate frame of multimodal small-animal imaging data. This eliminates the postural variability (e.g., of the head, back, and front limbs) that occurs in different time steps and due to modality differences and nonstandardized acquisition protocols.
conclusionsThe articulated atlas proves to be a useful tool for multimodality image combination, follow-up studies, and image processing in the scope of molecular imaging. The proposed models were made publicly available.
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