Evidence map›Paper›PMID 20824106›Full record

ArticlemBio2010

Membrane topology mapping of the O-antigen flippase (Wzx), polymerase (Wzy), and ligase (WaaL) from Pseudomonas aeruginosa PAO1 reveals novel domain architectures.

Salim T Islam, Véronique L Taylor, Meng Qi, Joseph S Lam

Open access · goldAbstract read
In one paragraph

Article in mBio, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
5.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 114 citations in OpenAlex.

  1. Journal of bacteriology · 2026
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  3. Protein-centric mechanisms of typhoidalFrontiers in cellular and infection microbiology · 2026
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  6. bioRxiv : the preprint server for biology · 2025
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  8. The relationship between virulence and drug resistance genes inFrontiers in cellular and infection microbiology · 2025
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  9. Article
  10. Review
  11. Article
  12. Defining Membrane Protein Topology Using pho-lac Reporter Fusions.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  13. Journal of bacteriology · 2023
    Article
  14. Review
  15. Exopolysaccharide Biosynthesis inInternational journal of molecular sciences · 2023
    Article
  16. Article
  17. A New Face of the Old Gene: Deletion of theInternational journal of molecular sciences · 2023
    Article
  18. Article
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Salim T IslamDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada.
Véronique L Taylor
Meng Qi
Joseph S Lam
University of Guelph · CA

Funding

Canadian Institutes of Health Research MOP-14687
6 · The paper itself

Abstract

Biosynthesis of B-band lipopolysaccharide (LPS) in Pseudomonas aeruginosa follows the Wzy-dependent pathway, requiring the integral inner membrane proteins Wzx (O-antigen [O-Ag] flippase), Wzy (O-Ag polymerase), and WaaL (O-Ag ligase). For an important first step in deciphering the mechanisms of LPS assembly, we set out to map the membrane topology of these proteins. Random and targeted 3'wzx, wzy, and waaL truncations were fused to a phoA-lacZalpha dual reporter capable of displaying both alkaline phosphatase and beta-galactosidase activity. The results from truncation fusion expression and the corresponding differential enzyme activity ratios allowed for the assignment of specific regions of the proteins to cytoplasmic, transmembrane (TM), or periplasmic loci. Protein orientation in the inner membrane was confirmed via C-terminal fusion to green fluorescent protein. Our data revealed unique TM domain properties in these proteins, particularly for Wzx, indicating the potential for a charged pore. Novel periplasmic and cytoplasmic loop domains were also uncovered, with the latter in Wzy and WaaL revealing tracts consistent with potential Walker A/B motifs.

Indexed as

Amino Acid SequenceBacterial ProteinsCarbon-Oxygen LigasesHexosyltransferasesMembrane ProteinsMolecular Sequence DataProtein Structure, TertiaryProtein TransportPseudomonas aeruginosaBacterial ProteinsCarbon-Oxygen LigasesHexosyltransferasesMembrane ProteinsO-antigen polymeraseWaaL protein, Pseudomonas aeruginosa

Identifiers

PMID20824106
PMCPMC2932511
OpenAlexW2099329633

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.