Evidence map›Paper›PMID 20824061›Full record

ArticlePloS one2010

Structural and mutational analysis of functional differentiation between synaptotagmins-1 and -7.

Mingshan Xue, Timothy K Craig, Ok-Ho Shin, Liyi Li, Chad A Brautigam, Diana R Tomchick, Thomas C Südhof, Christian Rosenmund, Josep Rizo

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
  2. Article
  3. eLife · 2020
    Article
  4. Doc2b CaScientific reports · 2019
    Article
  5. Review
  6. Article
  7. Exceptionally tight membrane-binding may explain the key role of the synaptotagmin-7 CProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  8. Article
  9. Article
  10. Article
  11. An Engineered Metal Sensor Tunes the Kinetics of Synaptic Transmission.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2015
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Cloning, expression, purification, crystallization and preliminary X-ray diffraction crystallographic study of human synaptotagmin 5 C2A domain.Acta crystallographica. Section F, Structural biology and crystallization communications · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Mingshan XueDepartment of Neuroscience, Baylor College of Medicine, Houston, Texas, United States of America.
Timothy K Craig
Ok-Ho Shin
Liyi Li
Chad A Brautigam
Diana R Tomchick
Thomas C Südhof
Christian Rosenmund
Josep Rizo
The University of Texas Southwestern Medical Center · USBaylor College of Medicine · USCharité - Universitätsmedizin Berlin · DEHoward Hughes Medical Institute · USThe University of Texas Medical Branch at Galveston · US

Funding

SYNAPTOTAGMIN AND C2 DOMAINS--STRUCTURE AND FUNCTIONR01NS040944 · NINDS · UT SOUTHWESTERN MEDICAL CENTER · PI RIZOREY, JOSE · 2001 to 2016
$6.4M
Analysis of Ca2+ -Triggered Neurotransmitter ReleaseR01NS050655 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI ROSENMUND, CHRISTIAN · 2005 to 2009
$1.5M
NINDS NIH HHS NS40944NINDS NIH HHS NS50655NINDS NIH HHS R01 NS040944NINDS NIH HHS R01 NS050655
6 · The paper itself

Abstract

Synaptotagmins are known to mediate diverse forms of Ca2+-triggered exocytosis through their C2 domains, but the principles underlying functional differentiation among them are unclear. Synaptotagmin-1 functions as a Ca2+ sensor in neurotransmitter release at central nervous system synapses, but synaptotagmin-7 does not, and yet both isoforms act as Ca2+ sensors in chromaffin cells. To shed light into this apparent paradox, we have performed rescue experiments in neurons from synaptotagmin-1 knockout mice using a chimera that contains the synaptotagmin-1 sequence with its C2B domain replaced by the synaptotagmin-7 C2B domain (Syt1/7). Rescue was not achieved either with the WT Syt1/7 chimera or with nine mutants where residues that are distinct in synaptotagmin-7 were restored to those present in synaptotagmin-1. To investigate whether these results arise because of unique conformational features of the synaptotagmin-7 C2B domain, we determined its crystal structure at 1.44 A resolution. The synaptotagmin-7 C2B domain structure is very similar to that of the synaptotagmin-1 C2B domain and contains three Ca2+-binding sites. Two of the Ca2+-binding sites of the synaptotagmin-7 C2B domain are also present in the synaptotagmin-1 C2B domain and have analogous ligands to those determined for the latter by NMR spectroscopy, suggesting that a discrepancy observed in a crystal structure of the synaptotagmin-1 C2B domain arose from crystal contacts. Overall, our results suggest that functional differentiation in synaptotagmins arises in part from subtle sequence changes that yield dramatic functional differences.

Indexed as

MutationAmino Acid SequenceAnimalsCalciumCells, CulturedHEK293 CellsHumansMiceMice, KnockoutMolecular ConformationMolecular Sequence DataNeuronsNeurotransmitter AgentsProtein Structure, TertiaryRatsSequence AlignmentCalciumNeurotransmitter AgentsSynaptotagmin ISynaptotagmins

Identifiers

PMID20824061
PMCPMC2932738
OpenAlexW2115761121

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.