Evidence map›Paper›PMID 20823212›Full record

ArticleInfection and immunity2010

Human conjunctival transcriptome analysis reveals the prominence of innate defense in Chlamydia trachomatis infection.

Angels Natividad, Tom C Freeman, David Jeffries, Matthew J Burton, David C W Mabey, Robin L Bailey, Martin J Holland

Open access · greenAbstract read
In one paragraph

Article in Infection and immunity, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
2.7field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
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  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Trachoma.Nature reviews. Disease primers · 2022
    Review
  9. Host-Pathogen Interactions ofPathogens (Basel, Switzerland) · 2021
    Article
  10. Article
  11. Article
  12. Indoleamine 2,3-Dioxygenase Cannot InhibitFrontiers in immunology · 2021
    Article
  13. Article
  14. Article
  15. Article
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Angels NatividadDepartment of Clinical Research, London School of Hygiene and Tropical Medicine, University of London, London, United Kingdom.
Tom C Freeman
David Jeffries
Matthew J Burton
David C W Mabey
Robin L Bailey
Martin J Holland
University of London · GBLondon School of Hygiene & Tropical Medicine · GBMRC Unit the Gambia · GMUniversity of Edinburgh · GB

Funding

Biotechnology and Biological Sciences Research Council BB/I001107/1Medical Research CouncilWellcome TrustWellcome Trust 079246/Z/06/Z
6 · The paper itself

Abstract

Trachoma is the leading infectious cause of blindness and is endemic in 52 countries. There is a critical need to further our understanding of the host response during disease and infection, as millions of individuals are still at risk of developing blinding sequelae. Infection of the conjunctival epithelial cells by the causative bacterium, Chlamydia trachomatis, stimulates an acute host response. The main clinical feature is a follicular conjunctivitis that is incompletely defined at the tissue-specific gene expression and molecular levels. To explore the features of disease and the response to infection, we measured host gene expression in conjunctival samples from Gambian children with active trachoma and healthy controls. Genome-wide expression and transcription network analysis identified signatures characteristic of the expected infiltrating immune cell populations, such as neutrophils and T/B lymphocytes. The expression signatures were also significantly enriched for genes in pathways which regulate NK cell activation and cytotoxicity, antigen processing and presentation, chemokines, cytokines, and cytokine receptors. The data suggest that in addition to polymorph and adaptive cellular responses, NK cells may contribute to a significant component of the conjunctival inflammatory response to chlamydial infection.

Indexed as

Gene Expression ProfilingChildChild, PreschoolChlamydia trachomatisConjunctivaCytokinesGambiaHumansImmunity, InnateInfantKiller Cells, NaturalLymphocyte ActivationOligonucleotide Array Sequence AnalysisProteinsTrachomaCytokinesProteins

Identifiers

PMID20823212
PMCPMC2976339
OpenAlexW2083146420

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.