Evidence map›Paper›PMID 20823192›Full record

ArticleThe Plant cell2010

The ubiquitin-proteasome system regulates the accumulation of Turnip yellow mosaic virus RNA-dependent RNA polymerase during viral infection.

Laurent Camborde, Séverine Planchais, Vincent Tournier, Anna Jakubiec, Gabrièle Drugeon, Emmanuelle Lacassagne, Stéphanie Pflieger, Mélanie Chenon, Isabelle Jupin

Abstract read
In one paragraph

Article in The Plant cell, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Crop antiviral defense: Past and future perspective.Science China. Life sciences · 2024
    Review
  7. Review
  8. Review
  9. Article
  10. Review
  11. The Great Game between Plants and Viruses: A Focus on Protein Homeostasis.International journal of molecular sciences · 2023
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Review

3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Laurent CambordeLaboratoire de Virologie Moléculaire, Institut Jacques Monod, Unité Mixte de Recherche 7592, Centre National de la Recherche Scientifique, Université Paris Diderot, 75205 Paris Cedex 13, France.
Séverine Planchais
Vincent Tournier
Anna Jakubiec
Gabrièle Drugeon
Emmanuelle Lacassagne
Stéphanie Pflieger
Mélanie Chenon
Isabelle Jupin

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Replication of positive-strand RNA viruses, the largest group of plant viruses, is initiated by viral RNA-dependent RNA polymerase (RdRp). Given its essential function in viral replication, understanding the regulation of RdRp is of great importance. Here, we show that Turnip yellow mosaic virus (TYMV) RdRp (termed 66K) is degraded by the proteasome at late time points during viral infection and that the accumulation level of 66K affects viral RNA replication in infected Arabidopsis thaliana cells. We mapped the cis-determinants responsible for 66K degradation within its N-terminal noncatalytic domain, but we conclude that 66K is not a natural N-end rule substrate. Instead, we show that a proposed PEST sequence within 66K functions as a transferable degradation motif. In addition, several Lys residues that constitute target sites for ubiquitylation were mapped; mutation of these Lys residues leads to stabilization of 66K. Altogether, these results demonstrate that TYMV RdRp is a target of the ubiquitin-proteasome system in plant cells and support the idea that proteasomal degradation may constitute yet another fundamental level of regulation of viral replication.

Indexed as

ArabidopsisHost-Pathogen InteractionsPhosphorylationProteasome Endopeptidase ComplexRNA-Dependent RNA PolymeraseRNA, ViralTymovirusUbiquitinVirus ReplicationProteasome Endopeptidase ComplexRNA-Dependent RNA PolymeraseRNA, ViralUbiquitin

Identifiers

PMID20823192
PMCPMC2965540

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.