Evidence map›Paper›PMID 20820947›Full record

ArticleMolecular biotechnology2011

The use of the condensed single protein production system for isotope-labeled outer membrane proteins, OmpA and OmpX in E. coli.

S Thangminlal Vaiphei, Yuefeng Tang, Gaetano T Montelione, Masayori Inouye

Abstract read
In one paragraph

Article in Molecular biotechnology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Computational redesign of the lipid-facing surface of the outer membrane protein OmpA.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  3. Advances in NMR structures of integral membrane proteins.Current opinion in structural biology · 2013
    Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

S Thangminlal VaipheiDepartment of Biochemistry, Robert Wood Johnson Medical School and Centre for Advanced Biotechnology and Medicine, 679 Hoes Lane, Piscataway, NJ 08854, USA.
Yuefeng Tang
Gaetano T Montelione
Masayori Inouye

Funding

Sub-project 9U54GM074958 · NIGMS · RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK · PI ARROWSMITH, CHERYL H · 2005 to 2009
$56.6M
Sub 9 at AECMU54GM075026 · NIGMS · NEW YORK STRUCTURAL BIOLOGY CENTER · PI HENDRICKSON, WAYNE A. · 2005 to 2009
$16.8M
The Method for Determination of Membrane Protein Structures without Purification R01GM085449 · NIGMS · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI INOUYE, MASAYORI · 2008 to 2011
$1.2M
NIGMS NIH HHS 5R01GM085449NIGMS NIH HHS R01 GM085449NIGMS NIH HHS U54 GM074958NIGMS NIH HHS U54 GM075026
6 · The paper itself

Abstract

Gram-negative bacteria consist of two independent membranes, the inner cytoplasmic membrane and the outer membrane. The outer membrane contains a number of β-barrel proteins such as OmpF, OmpC, OmpA, and OmpX. In this article, we explored to use the condensed Single Protein Production (cSPP) system for isotope labelling of OmpA and OmpX for NMR structural study, both of which are known to consist of eight β-strands forming a barrel in the outer membrane. Using a deletion strain lacking all major outer membrane proteins, both OmpA and OmpX were expressed well in a 20-fold cSPP system. We demonstrated that outer membrane fractions prepared from the cSPP system in M9 medium containing ¹⁵N-NH₄Cl can be directly used for NMR structural study of the outer mebrane proteins without any further purification to get excellent [¹H-¹⁵N]-TROSY spectra. This method would be quite valuable for the study of pure proteins in their native membrane environment without the need of purification and reconstitution.

Indexed as

Bacterial Outer Membrane ProteinsDeuteriumEscherichia coli ProteinsHydrolasesMagnetic Resonance SpectroscopyNitrogen IsotopesProtonsBacterial Outer Membrane ProteinsDeuteriumEscherichia coli ProteinsHydrolasesNitrogen IsotopesOMPA outer membrane proteinsOmpX protein, E coliProtons

Identifiers

PMID20820947
PMCPMC4190416

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.