Evidence map›Paper›PMID 20820872›Full record

ArticleJournal of neuro-oncology2011

Whole-genomic survey of oligodendroglial tumors: correlation between allelic imbalances and gene expression profiles.

Rubén Ferrer-Luna, Lina Núñez, José Piquer, Eugenia Arias, Francisco Dasí, Andrés Cervio, Naomi Arakaki, Gustavo Sevlever, Bernardo Celda, Horacio Martinetto

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In one paragraph

Article in Journal of neuro-oncology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it, 9 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Rubén Ferrer-LunaDepartment of Physical-Chemistry, Universitat de Valencia, Dr. Moliner sn, 46100 Burjassot, Valencia, Spain.
Lina Núñez
José Piquer
Eugenia Arias
Francisco Dasí
Andrés Cervio
Naomi Arakaki
Gustavo Sevlever
Bernardo Celda
Horacio Martinetto
Fundación para la Lucha contra las Enfermedades Neurológicas de la Infancia · ARHospital Clínico Universitario de Valencia · ESHospital de La Ribera · ESInstituto de Salud Carlos III · ESUniversitat de València · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Malignant gliomas are the most common subtype of primary central nervous system (CNS) tumors. Their pathological classification, however, remains subjective, stimulating researchers to actively seek objective molecular markers to discover alternative and more reproducible tools for improved subtypification. Herein, we present a global survey of genomic alterations in oligodendroglial tumors (OT). Genetic and epigenetic alterations identified in this study are correlated with OT molecular groups we have recently reported: a neurogenic group composed of tumors with loss of heterozygosity (LOH) at 1p-19q, IDH1 mutations, and MGMT promoter methylation, showing good prognosis; an intermediate group, presenting TP53 mutations or LOH at 17p, IDH1 mutations, and GSTP1 promoter methylation; and a proliferative group, presenting major genetic alterations (LOH at 10q, EGFR amplification, and CDKN2A/ARF deletion) and poor prognosis. These results allowed us to refine our molecular characterization associated with prognosis, referring exclusively to oligodendroglial tumors.

Indexed as

Allelic ImbalanceGene Expression ProfilingGenome, HumanAdolescentAdultAgedBiomarkers, TumorBlotting, WesternBrain NeoplasmsChild, PreschoolChromosomes, HumanDNA MethylationEpigenomicsHumansLoss of HeterozygosityMiddle AgedBiomarkers, TumorRNA, Messenger

Identifiers

PMID20820872
OpenAlexW2037702906

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.