Evidence map›Paper›PMID 20818396›Full record

ArticleNature immunology2010

SLAM is a microbial sensor that regulates bacterial phagosome functions in macrophages.

Scott B Berger, Xavier Romero, Chunyan Ma, Guoxing Wang, William A Faubion, Gongxian Liao, Ewoud Compeer, Marton Keszei, Lucia Rameh, Ninghai Wang and 4 more

Open access · greenAbstract read
In one paragraph

Article in Nature immunology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 103 papers.

0numbers the graph read from it
0cells of the map it votes in
103citing papers in PubMed
5.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

103 citing papers in PubMed, 172 citations in OpenAlex.

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  17. Class III PI3K Biology.Current topics in microbiology and immunology · 2022
    Article
  18. Article
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  20. Article

43 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

Scott B BergerDivision of Immunology, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, Massachusetts, USA. sberger@bidmc.harvard.edu
Xavier Romero
Chunyan Ma
Guoxing Wang
William A Faubion
Gongxian Liao
Ewoud Compeer
Marton Keszei
Lucia Rameh
Ninghai Wang
Marianne Boes
Jose R Regueiro
Hans-Christian Reinecker
Cox Terhorst
Harvard University Press · USBoston Biomedical Research Institute · USMayo Clinic · USUniversidad Complutense de Madrid · ES

Funding

Pilot & Feasibility ProgramP30DK043351 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI RAYMOND T CHUNG · 1991 to 2026
$35.3M
PILOT AND FEASIBILTY PROGRAMP30DK084567 · NIDDK · MAYO CLINIC ROCHESTER · PI GREGORY J. GORES · 2009 to 2026
$22.2M
The Slamf3, Slamf5, and Slamf6 receptor-induced pathways to murine lupusP01AI065687 · NIAID · BETH ISRAEL DEACONESS MEDICAL CENTER · PI TERHORST, CORNELIS P · 2006 to 2016
$14.7M
Innate Immune Defense Mechanisms in the IntestineR01AI113333 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI REINECKER, HANS-CHRISTIAN · 2014 to 2025
$5.7M
Antigen Recognition at Intestinal Epithelial InterphasesR01DK068181 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI REINECKER, HANS-CHRISTIAN · 2005 to 2017
$5.2M
Cell Surface Receptors on T Cells and MacrophagesR01AI015066 · NIAID · DANA-FARBER CANCER INSTITUTE · PI TERHORST, CORNELIS P · 1985 to 2011
$4.7M
PATHWAYS TO INFLAMMATORY BOWEL DISEASER01DK052510 · NIDDK · BETH ISRAEL DEACONESS MEDICAL CENTER · PI TERHORST, CORNELIS P · 1997 to 2012
$4.4M
Cell Surface Receptors on T Cells and MacrophagesR56AI015066 · NIAID · BETH ISRAEL DEACONESS MEDICAL CENTER · PI TERHORST, CORNELIS P · 2013 to 2013
$317k
NIAID NIH HHS AI-15066NIAID NIH HHS P01 AI065687NIAID NIH HHS R01 AI015066NIAID NIH HHS R01 AI113333NIAID NIH HHS R56 AI015066NIDDK NIH HHS DK-003506-20NIDDK NIH HHS DK-068181NIDDK NIH HHS P30 DK043351NIDDK NIH HHS P30 DK084567NIDDK NIH HHS R01 DK052510NIDDK NIH HHS R01 DK068181
6 · The paper itself

Abstract

Phagocytosis is a pivotal process by which macrophages eliminate microorganisms after recognition by pathogen sensors. Here we unexpectedly found that the self ligand and cell surface receptor SLAM functioned not only as a costimulatory molecule but also as a microbial sensor that controlled the killing of gram-negative bacteria by macrophages. SLAM regulated activity of the NADPH oxidase NOX2 complex and phagolysosomal maturation after entering the phagosome, following interaction with the bacterial outer membrane proteins OmpC and OmpF. SLAM recruited a complex containing the intracellular class III phosphatidylinositol kinase Vps34, its regulatory protein kinase Vps15 and the autophagy-associated molecule beclin-1 to the phagosome, which was responsible for inducing the accumulation of phosphatidylinositol-3-phosphate, a regulator of both NOX2 function and phagosomal or endosomal fusion. Thus, SLAM connects the gram-negative bacterial phagosome to ubiquitous cellular machinery responsible for the control of bacterial killing.

Indexed as

AnimalsAntigens, CDApoptosis Regulatory ProteinsBacterial ProteinsBeclin-1Cells, CulturedEndosomal Sorting Complexes Required for TransportEscherichia coliEscherichia coli InfectionsMacrophagesMaleMembrane GlycoproteinsMiceMice, Inbred BALB CMice, KnockoutMolecular ChaperonesAntigens, CDApoptosis Regulatory ProteinsBacterial ProteinsBeclin-1Becn1 protein, mouseCybb protein, mouseEndosomal Sorting Complexes Required for TransportMembrane GlycoproteinsMolecular ChaperonesNADPH Oxidase 2NADPH OxidasesOmpC proteinOmpF proteinPhosphatidylinositol 3-KinasesPik3r4 protein, mousePorinsProtein Serine-Threonine KinasesReceptors, Cell SurfaceSignaling Lymphocytic Activation Molecule Family Member 1SseB protein, Salmonella typhimuriumVacuolar Sorting Protein VPS15

Identifiers

PMID20818396
PMCPMC3338319
OpenAlexW2092475403

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.