Evidence map›Paper›PMID 20816984›Full record

ArticleJournal of molecular biology2010

A structural hinge in eukaryotic MutY homologues mediates catalytic activity and Rad9-Rad1-Hus1 checkpoint complex interactions.

Paz J Luncsford, Dau-Yin Chang, Guoli Shi, Jade Bernstein, Amrita Madabushi, Dimeka N Patterson, A-Lien Lu, Eric A Toth

Abstract read
In one paragraph

Article in Journal of molecular biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed, 1 pooled it
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 1 synthesis or guideline pooled it, 67 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Noncatalytic Domains in DNA Glycosylases.International journal of molecular sciences · 2022
    Review
  10. Article
  11. Article
  12. Article
  13. MUTYH: Not just polyposis.World journal of clinical oncology · 2020
    Review
  14. Article
  15. Review
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Paz J LuncsfordDepartment of Biochemistry and Molecular Biology, University of Maryland School of Medicine, 108 North Greene Street, Baltimore, MD 21201, USA.
Dau-Yin Chang
Guoli Shi
Jade Bernstein
Amrita Madabushi
Dimeka N Patterson
A-Lien Lu
Eric A Toth
University of Maryland, Baltimore · USUniversity of Maryland Marlene and Stewart Greenebaum Comprehensive Cancer Center

Funding

REPAIR OF OXIDATIVELY DAMAGED GUANINES IN HUMANR01CA078391 · NCI · UNIVERSITY OF MARYLAND BALTIMORE · PI LU-CHANG, A-LIEN L · 1998 to 2013
$3.4M
MECHANISTIC STUDIES OF DNA MISMATCH REPAIRR01GM035132 · NIGMS · UNIVERSITY OF MARYLAND BALTIMORE · PI LU-CHANG, A-LIEN L · 1985 to 2006
$1.9M
Repair of Oxidatively Damaged GuaninesR56CA078391 · NCI · UNIVERSITY OF MARYLAND BALTIMORE · PI LU-CHANG, A-LIEN L · 2008 to 2008
$240k
NCI NIH HHS CA78391NCI NIH HHS R01 CA078391NCI NIH HHS R56 CA078391NIGMS NIH HHS GM35132NIGMS NIH HHS R01 GM035132
6 · The paper itself

Abstract

The DNA glycosylase MutY homologue (MYH or MUTYH) removes adenines misincorporated opposite 8-oxoguanine as part of the base excision repair pathway. Importantly, defects in human MYH (hMYH) activity cause the inherited colorectal cancer syndrome MYH-associated polyposis. A key feature of MYH activity is its coordination with cell cycle checkpoint via interaction with the Rad9-Rad1-Hus1 (9-1-1) complex. The 9-1-1 complex facilitates cell cycle checkpoint activity and coordinates this activity with ongoing DNA repair. The interdomain connector (IDC, residues 295-350) between the catalytic domain and the 8-oxoguanine recognition domain of hMYH is a critical element that maintains interactions with the 9-1-1 complex. We report the first crystal structure of a eukaryotic MutY protein, a fragment of hMYH (residues 65-350) that consists of the catalytic domain and the IDC. Our structure reveals that the IDC adopts a stabilized conformation projecting away from the catalytic domain to form a docking scaffold for 9-1-1. We further examined the role of the IDC using Schizosaccharomyces pombe MYH as model system. In vitro studies of S. pombe MYH identified residues I261 and E262 of the IDC (equivalent to V315 and E316 of the hMYH IDC) as critical for maintaining the MYH/9-1-1 interaction. We determined that the eukaryotic IDC is also required for DNA damage selection and robust enzymatic activity. Our studies also provide the first evidence that disruption of the MYH/9-1-1 interaction diminishes the repair of oxidative DNA damage in vivo. Thus, preserving the MYH/9-1-1 interaction contributes significantly to minimizing the mutagenic potential of oxidative DNA damage.

Indexed as

Cell Cycle ProteinsDNADNA DamageDNA GlycosylasesDNA RepairExonucleasesHumansHydrogen PeroxideMutationProtein BindingSchizosaccharomycesSchizosaccharomyces pombe ProteinsCell Cycle ProteinsDNADNA GlycosylasesExonucleasesHUS1B protein, humanHUS1 protein, humanHydrogen PeroxidemutY adenine glycosylaseRad1 protein, humanrad9 proteinSchizosaccharomyces pombe Proteins

Identifiers

PMID20816984
PMCPMC2953589
OpenAlexW2109220349

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.