Evidence map›Paper›PMID 20816962›Full record

ArticleFEBS letters2010

A new hypothesis on the simultaneous direct and indirect proton pump mechanisms in NADH-quinone oxidoreductase (complex I).

Tomoko Ohnishi, Eiko Nakamaru-Ogiso, S Tsuyoshi Ohnishi

Open access · bronzeAbstract read
In one paragraph

Article in FEBS letters, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
  2. Review
  3. Symmetry-related proton transfer pathways in respiratory complex I.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  4. Review
  5. Review
  6. On the mechanism of respiratory complex I.Journal of bioenergetics and biomembranes · 2014
    Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. A model of the proton translocation mechanism of complex I.The Journal of biological chemistry · 2011
    Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Tomoko OhnishiJohnson Research Foundation, Department of Biochemistry and Biophysics, University of Pennsylvania School of Medicine, Philadelphia, PA 19104-6059, USA. ohnishi@mail.med.upenn.edu
Eiko Nakamaru-Ogiso
S Tsuyoshi Ohnishi
University of Pennsylvania · USJohnson Foundation · US

Funding

PROTON &ELECTRON TRANSFER &ENERGY COUPLING IN SIT IR01GM030736 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI OHNISHI, TOMOKO NONE · 1985 to 2010
$3.1M
NIGMS NIH HHS R01 GM030736NIGMS NIH HHS R01GM030736
6 · The paper itself

Abstract

Recently, Sazanov's group reported the X-ray structure of whole complex I [Nature, 465, 441 (2010)], which presented a strong clue for a "piston-like" structure as a key element in an "indirect" proton pump. We have studied the NuoL subunit which has a high sequence similarity to Na(+)/H(+) antiporters, as do the NuoM and N subunits. We constructed 27 site-directed NuoL mutants. Our data suggest that the H(+)/e(-) stoichiometry seems to have decreased from (4H(+)/2e(-)) in the wild-type to approximately (3H(+)/2e(-)) in NuoL mutants. We propose a revised hypothesis that each of the "direct" and the "indirect" proton pumps transports 2H(+) per 2e(-).

Indexed as

Models, BiologicalBacterial ProteinsElectron Transport Complex IEscherichia coli ProteinsKineticsModels, MolecularMutagenesis, Site-DirectedMutant ProteinsNADH DehydrogenaseProtein Structure, SecondaryProtein SubunitsProton PumpsThermus thermophilusBacterial ProteinsElectron Transport Complex IEscherichia coli ProteinsMutant ProteinsNADH DehydrogenaseNuoL protein, E coliProtein SubunitsProton Pumps

Identifiers

PMID20816962
PMCPMC2978500
OpenAlexW2142412128

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.