Evidence map›Paper›PMID 20813889›Full record

ArticleAmerican journal of respiratory and critical care medicine2011

Genetic variation in the FAS gene and associations with acute lung injury.

Bradford J Glavan, Tarah D Holden, Christopher H Goss, R Anthony Black, Margaret J Neff, Avery B Nathens, Thomas R Martin, Mark M Wurfel, ARDSnet Investigators

Open access · greenAbstract read
In one paragraph

Article in American journal of respiratory and critical care medicine, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
6.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
  2. Review
  3. Pathogenesis of pneumonia and acute lung injury.Clinical science (London, England : 1979) · 2022
    Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Pathogenesis of Acute Respiratory Distress Syndrome.Seminars in respiratory and critical care medicine · 2019
    Review
  11. The Lung Microbiome and ARDS. It Is Time to Broaden the Model.American journal of respiratory and critical care medicine · 2018
    Article
  12. Article
  13. Article
  14. Lung pericyte-like cells are functional interstitial immune sentinel cells.American journal of physiology. Lung cellular and molecular physiology · 2017
    Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Bradford J GlavanSection of Pulmonary/Critical Care Medicine, Harborview Medical Center, Seattle, Washington, USA. bglavan@u.washington.edu
Tarah D Holden
Christopher H Goss
R Anthony Black
Margaret J Neff
Avery B Nathens
Thomas R Martin
Mark M Wurfel
ARDSnet Investigators
University of Washington · USSt. Michael's Hospital · CAUniversity of Puget Sound · US

Funding

SCCOR in Translational Research in Acute Lung InjuryP50HL073996 · NHLBI · UNIVERSITY OF WASHINGTON · PI MARTIN, THOMAS R · 2003 to 2007
$15.7M
Genetic control of gene expression during innate immune activationR01HL089807 · NHLBI · UNIVERSITY OF WASHINGTON · PI WURFEL, MARK M · 2007 to 2011
$2.6M
NHLBI NIH HHS P50-HL-73996NHLBI NIH HHS R01 HL089807NHLBI NIH HHS R01-HL-089807
6 · The paper itself

Abstract

rationaleFas (CD95) modulates apoptosis and inflammation and is believed to play an important role in lung injury.

objectivesTo determine if common genetic variation in FAS is associated with acute lung injury (ALI) susceptibility, risk of death, and FAS gene expression.

methodsWe genotyped 14 single nucleotide polymorphisms (tagSNPS) in FAS in samples from healthy white volunteers (control subjects, n = 294) and patients with ALI (cases, n = 324) from the ARDSnet Fluid and Catheter Treatment Trial (FACTT). FAS genotypes associated with ALI in the discovery study were confirmed in a nested case-control validation study of critically ill patients at risk for ALI (n = 657). We also tested for associations between selected tagSNPS and FAS mRNA levels in whole blood from healthy control subjects exposed to media alone or LPS ex vivo. MEASUREMENTS AND MAIN

resultsWe identified associations between four tagSNPs in FAS (FAS(-11341A>T) [rs17447140], FAS(9325G>A) [rs2147420], FAS(21541C>T) [rs2234978], and FAS(24484A>T) [rs1051070]) and ALI case status. Haplotype-based analyses suggested that three of the tagSNPs (FAS(9325G>A), FAS(21541C>T), and FAS(24484A>T)) function as a unit. The association with this haplotype and ALI was validated in a nested case-control study of at-risk subjects (P = 0.05). This haplotype was also associated with increased FAS mRNA levels in response to LPS stimulation. There was no association between FAS polymorphisms and risk of death among ALI cases.

conclusionsCommon genetic variants in FAS are associated with ALI susceptibility. This is the first genetic evidence supporting a role for FAS in ALI.

Indexed as

Acute Lung InjuryCase-Control Studiesfas ReceptorFemaleGene FrequencyGenetic Association StudiesGenetic Predisposition to DiseaseGenotypeHaplotypesHumansLinkage DisequilibriumMaleMiddle AgedPolymorphism, Single NucleotideRisk FactorsFAS protein, humanfas Receptor

Identifiers

PMID20813889
PMCPMC3056231
OpenAlexW2081994681

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.