Evidence map›Paper›PMID 20813140›Full record

ArticleMolecular and biochemical parasitology2011

Microsatellite polymorphism in the sexually transmitted human pathogen Trichomonas vaginalis indicates a genetically diverse parasite.

Melissa Conrad, Zuzana Zubacova, Linda A Dunn, Jacqui Upcroft, Steven A Sullivan, Jan Tachezy, Jane M Carlton

Abstract read
In one paragraph

Article in Molecular and biochemical parasitology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
3.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 63 citations in OpenAlex.

  1. bioRxiv : the preprint server for biology · 2026
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  6. Prevalence and Genotype ofJournal of tropical medicine · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Melissa ConradDepartment of Medical Parasitology, New York University Langone Medical Center, New York, NY 10010, USA.
Zuzana Zubacova
Linda A Dunn
Jacqui Upcroft
Steven A Sullivan
Jan Tachezy
Jane M Carlton
NYU Langone Health · USCharles University · CZQIMR Berghofer Medical Research Institute · AU

Funding

INFECTIOUS DISEASES &BASIC MICROBIOLOGICAL MECHANISMST32AI007180 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI WEISER, JEFFREY NEAL · 1985 to 2022
$8.9M
Advancing research on the sexually transmitted female 'nuisance' pathogen TrichomR21AI083954 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI CARLTON, JANE M · 2009 to 2010
$465k
NIAID NIH HHS R21 AI083954NIAID NIH HHS T32 AI007180NIAID NIH HHS T32AI007180-27
6 · The paper itself

Abstract

Given the growing appreciation of serious health sequelae from widespread Trichomonas vaginalis infection, new tools are needed to study the parasite's genetic diversity. To this end we have identified and characterized a panel of 21 microsatellites and six single-copy genes from the T. vaginalis genome, using seven laboratory strains of diverse origin. We have (1) adapted our microsatellite typing method to incorporate affordable fluorescent labeling, (2) determined that the microsatellite loci remain stable in parasites continuously cultured for up to 17 months, and (3) evaluated microsatellite marker coverage of the six chromosomes that comprise the T. vaginalis genome, using fluorescent in situ hybridization (FISH). We have used the markers to show that T. vaginalis is a genetically diverse parasite in a population of commonly used laboratory strains. In addition, we have used phylogenetic methods to infer evolutionary relationships from our markers in order to validate their utility in future population analyses. Our panel is the first series of robust polymorphic genetic markers for T. vaginalis that can be used to classify and monitor lab strains, as well as provide a means to measure the genetic diversity and population structure of extant and future T. vaginalis isolates.

Indexed as

Microsatellite RepeatsPolymorphism, GeneticCluster AnalysisDNA FingerprintingDNA, ProtozoanHumansIn Situ Hybridization, FluorescenceMolecular Sequence DataParasitologyPhylogenySequence Analysis, DNATrichomonas vaginalisDNA, Protozoan

Identifiers

PMID20813140
PMCPMC2974001
OpenAlexW2067495186

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.