Evidence map›Paper›PMID 20811366›Full record

ArticleNature2010

Selectivity mechanism of the nuclear pore complex characterized by single cargo tracking.

Alan R Lowe, Jake J Siegel, Petr Kalab, Merek Siu, Karsten Weis, Jan T Liphardt

Abstract read
In one paragraph

Article in Nature, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 83 papers.

0numbers the graph read from it
0cells of the map it votes in
83citing papers in PubMed
7.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

83 citing papers in PubMed, 157 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Integrative mapping reveals molecular features underlying the mechanism of nucleocytoplasmic transport.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Recent Advances in Single-Molecule Tracking and Imaging Techniques.Annual review of analytical chemistry (Palo Alto, Calif.) · 2023
    Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

23 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Alan R LoweDepartment of Physics, University of California, Berkeley, California 94720, USA.
Jake J Siegel
Petr Kalab
Merek Siu
Karsten Weis
Jan T Liphardt
University of California, Berkeley · USIllumina (United States) · USLawrence Berkeley National Laboratory · US

Funding

TRANS-NETWORK PROJECTSU54CA143836 · NCI · UNIVERSITY OF CALIFORNIA BERKELEY · PI LIPHARDT, JAN T. · 2009 to 2014
$15.1M
Structure and function of the nuclear pore complexR01GM058065 · NIGMS · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI HEALD, REBECCA W · 1998 to 2015
$4.6M
Cellular functions of Ran GTPaseZIABC011084 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI KALAB, PETR · 2009 to 2016
$4.3M
Plasmon RulersR01GM077856 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI LIPHARDT, JAN T. · 2008 to 2012
$1.6M
A feasibility study of genetically encoded fluorescent gold nanoclustersR01GM084716 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI LIPHARDT, JAN T. · 2008 to 2009
$495k
NCI NIH HHS U54 CA143836NCI NIH HHS U54CA143836NIGMS NIH HHS GM058065NIGMS NIH HHS GM77856NIGMS NIH HHS R01 GM058065NIGMS NIH HHS R01 GM077856NIGMS NIH HHS R01 GM084716
6 · The paper itself

Abstract

The nuclear pore complex (NPC) mediates all exchange between the cytoplasm and the nucleus. Small molecules can passively diffuse through the NPC, whereas larger cargos require transport receptors to translocate. How the NPC facilitates the translocation of transport receptor/cargo complexes remains unclear. To investigate this process, we tracked single protein-functionalized quantum dot cargos as they moved through human NPCs. Here we show that import proceeds by successive substeps comprising cargo capture, filtering and translocation, and release into the nucleus. Most quantum dots are rejected at one of these steps and return to the cytoplasm, including very large cargos that abort at a size-selective barrier. Cargo movement in the central channel is subdiffusive and cargos that can bind more transport receptors diffuse more freely. Without Ran GTPase, a critical regulator of transport directionality, cargos still explore the entire NPC, but have a markedly reduced probability of exit into the nucleus, suggesting that NPC entry and exit steps are not equivalent and that the pore is functionally asymmetric to importing cargos. The overall selectivity of the NPC seems to arise from the cumulative action of multiple reversible substeps and a final irreversible exit step.

Indexed as

Protein TransportActive Transport, Cell NucleusCytoplasmDiffusionHeLa CellsHumansMolecular WeightMovementNuclear PoreNucleocytoplasmic Transport ProteinsProteinsQuantum Dotsran GTP-Binding ProteinSubstrate SpecificityNucleocytoplasmic Transport ProteinsProteinsran GTP-Binding Protein

Identifiers

PMID20811366
PMCPMC2948059
OpenAlexW2018316000

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.