Evidence map›Paper›PMID 20810773›Full record

ArticleJournal of clinical microbiology2010

Variability of the polymerase gene (NS5B) in hepatitis C virus-infected women.

Jason T Blackard, Gang Ma, Berkeley N Limketkai, Jeffrey A Welge, Peter D Dryer, Christina M Martin, Yoichi Hiasa, Lynn E Taylor, Kenneth H Mayer, Denise J Jamieson and 1 more

Open access · greenAbstract read
In one paragraph

Article in Journal of clinical microbiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 15 citations in OpenAlex.

  1. Vertical Transmission of Hepatitis C Virus Among Women With a History of Injection Opioid Use.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Jason T BlackardDepartment of Internal Medicine, Division of Digestive Diseases, University of Cincinnati College of Medicine, Cincinnati, Ohio 45267, USA. jason.blackard@uc.edu
Gang Ma
Berkeley N Limketkai
Jeffrey A Welge
Peter D Dryer
Christina M Martin
Yoichi Hiasa
Lynn E Taylor
Kenneth H Mayer
Denise J Jamieson
Kenneth E Sherman
University of Cincinnati Medical Center · USBrown University · USCenters for Disease Control and Prevention · USEhime University · JPMiriam Hospital · US

Funding

Translational ScienceP30AI042853 · NIAID · MIRIAM HOSPITAL · PI LARRY K BROWN · 1998 to 2026
$51.7M
PARTNERS/FENWAY/SHATTUCK CENTER FOR AIDS RESEARCHP30AI042851 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI WALKER, BRUCE D · 2000 to 2003
$5.7M
Buprenorphine as a Bridge to HCV Treatment for HIV/HCV Coinfected Opioid UsersK23DA020383 · NIDA · MIRIAM HOSPITAL · PI TAYLOR, LYNN ERICA · 2008 to 2012
$882k
Extrahepatic Replication and Viral Evolution of HCV During HCV/HIV Co-infectionR21DA022148 · NIDA · UNIVERSITY OF CINCINNATI · PI BLACKARD, JASON T · 2006 to 2007
$348k
NIAID NIH HHS P30 AI042851NIAID NIH HHS P30 AI042853NIAID NIH HHS P30-AI42851NIAID NIH HHS P30 AI42853NIDA NIH HHS K23 DA020383NIDA NIH HHS R21 DA022148PHS HHS U64/CCU106795
6 · The paper itself

Abstract

There are limited data on diversity within the hepatitis C virus polymerase (NS5B). In concordance with its key functional role during the life cycle, NS5B intrapatient variability was low. Moreover, differences between NS5B nonsynonymous (dN) and synonymous (dS) mutation rates (dN - dS) were positively correlated with CD4 cell count, while nonsynonymous mutations were strongly correlated with reduced replication in vivo.

Indexed as

Genetic VariationAmino Acid SequenceCD4 Lymphocyte CountFemaleHepacivirusHepatitis CHumansMolecular Sequence DataRNA-Dependent RNA PolymeraseSequence Analysis, DNAViral Nonstructural ProteinsNS-5 protein, hepatitis C virusRNA-Dependent RNA PolymeraseViral Nonstructural Proteins

Identifiers

PMID20810773
PMCPMC3020841
OpenAlexW2084744585

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.