Evidence map›Paper›PMID 20810423›Full record

ArticleThe Journal of antimicrobial chemotherapy2010

Targeting the chromosome partitioning protein ParA in tuberculosis drug discovery.

Shahista Nisa, Marian C J Blokpoel, Brian D Robertson, Joel D A Tyndall, Shichun Lun, William R Bishai, Ronan O'Toole

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of antimicrobial chemotherapy, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 37 citations in OpenAlex.

  1. Inhibitor of Chromosome Segregation inACS chemical biology · 2024
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  11. Mycobacterial Growth.Cold Spring Harbor perspectives in medicine · 2015
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 3 countries.

Shahista NisaSchool of Biological Sciences, Victoria University of Wellington, Wellington, New Zealand.
Marian C J Blokpoel
Brian D Robertson
Joel D A Tyndall
Shichun Lun
William R Bishai
Ronan O'Toole
Imperial College London · GBVictoria University of Wellington · NZJohns Hopkins Medicine · USJohns Hopkins University · USUniversity of Otago · NZ

Funding

Mycobacterium tuberculosis Survival Regulatory GenesR01AI037856 · NIAID · JOHNS HOPKINS UNIVERSITY · PI BISHAI, WILLIAM RAMSES · 1997 to 2020
$7.2M
GENE REGULATION AND VIRULENCE IN TB AND MACR01AI036973 · NIAID · JOHNS HOPKINS UNIVERSITY · PI BISHAI, WILLIAM RAMSES · 1999 to 2014
$5.7M
PK/PD Evaluation Resistance Development in Caseating GranulomaR01AI079590 · NIAID · JOHNS HOPKINS UNIVERSITY · PI BISHAI, WILLIAM RAMSES · 2008 to 2011
$2.5M
SEARCH FOR GENETIC REGULATORS OF LATENCY IN M TBR29AI036973 · NIAID · JOHNS HOPKINS UNIVERSITY · PI BISHAI, WILLIAM RAMSES · 1994 to 1998
–
NIAID NIH HHS AI079590NIAID NIH HHS AI36973NIAID NIH HHS AI37856
6 · The paper itself

Abstract

objectiveTo identify inhibitors of the essential chromosome partitioning protein ParA that are active against Mycobacterium tuberculosis.

methodsAntisense expression of the parA orthologue MSMEG_6939 was induced on the Mycobacterium smegmatis background. Screening of synthetic chemical libraries was performed to identify compounds with higher anti-mycobacterial activity in the presence of parA antisense. Differentially active compounds were validated for specific inhibition of purified ParA protein from M. tuberculosis (Rv3918c). ParA inhibitors were then characterized for their activity towards M. tuberculosis in vitro.

resultsUnder a number of culture conditions, parA antisense expression in M. smegmatis resulted in reduced growth. This effect on growth provided a basis for the detection of compounds that increased susceptibility to expression of parA antisense. Two compounds identified from library screening, phenoxybenzamine and octoclothepin, also inhibited the in vitro ATPase activity of ParA from M. tuberculosis. Structural in silico analyses predict that phenoxybenzamine and octoclothepin undergo interactions compatible with the active site of ParA. Octoclothepin exhibited significant bacteriostatic activity towards M. tuberculosis.

conclusionsOur data support the use of whole-cell differential antisense screens for the discovery of inhibitors of specific anti-tubercular drug targets. Using this approach, we have identified an inhibitor of purified ParA and whole cells of M. tuberculosis.

Indexed as

Adenosine TriphosphatasesAntitubercular AgentsBacterial ProteinsChromosome SegregationDibenzothiepinsDrug Evaluation, PreclinicalEnzyme InhibitorsGene Knockdown TechniquesHumansMycobacterium smegmatisMycobacterium tuberculosisPhenoxybenzamineRNA, AntisenseAdenosine TriphosphatasesAntitubercular AgentsBacterial Proteinschromosome partition proteins, bacterialDibenzothiepinsEnzyme InhibitorsoctoclothepinePhenoxybenzamineRNA, Antisense

Identifiers

PMID20810423
PMCPMC2980951
OpenAlexW2138077583

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.