Evidence map›Paper›PMID 20809368›Full record

ArticleJournal of the Association for Research in Otolaryngology : JARO2010

Identification of the hair cell soma-1 antigen, HCS-1, as otoferlin.

Richard J Goodyear, P Kevin Legan, Jeffrey R Christiansen, Bei Xia, Julia Korchagina, Jonathan E Gale, Mark E Warchol, Jeffrey T Corwin, Guy P Richardson

Open access · hybridAbstract read
In one paragraph

Article in Journal of the Association for Research in Otolaryngology : JARO, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
2.1field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Transmission Disrupted: Modeling Auditory Synaptopathy in Zebrafish.Frontiers in cell and developmental biology · 2018
    Review
  12. Wnt9a Can Influence Cell Fates and Neural Connectivity across the Radial Axis of the Developing Cochlea.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2017
    Article
  13. Review
  14. Delayed Otolith Development Does Not Impair Vestibular Circuit Formation in Zebrafish.Journal of the Association for Research in Otolaryngology : JARO · 2017
    Article
  15. Activity-Dependent Phosphorylation by CaMKIIδ Alters the CaFrontiers in synaptic neuroscience · 2017
    Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Richard J GoodyearSchool of Life Sciences, University of Sussex, Falmer, Brighton, BN1 9QG, UK. r.j.goodyear@sussex.ac.uk
P Kevin Legan
Jeffrey R Christiansen
Bei Xia
Julia Korchagina
Jonathan E Gale
Mark E Warchol
Jeffrey T Corwin
Guy P Richardson
University of Sussex · GBUniversity of Virginia · USUniversity College London · GBWashington University in St. Louis · USWest Virginia University · US

Funding

Structural dynamics of developing auditory circuitsP20RR015574 · NCRR · WEST VIRGINIA UNIVERSITY · PI SPIROU, GEORGE A · 2000 to 2009
$18.1M
GROWTH AND REGENERATION IN THE INNER EARR01DC000200 · NIDCD · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI CORWIN, JEFFREY T · 1989 to 2018
$9.7M
Sensory Function CoreP30DC004665 · NIDCD · WASHINGTON UNIVERSITY · PI FADDIS, BRIAN T · 2001 to 2015
$8.0M
MECHANISMS OF SENSORY REGENERATIONR01DC006283 · NIDCD · WASHINGTON UNIVERSITY · PI WARCHOL, MARK · 2004 to 2025
$6.8M
Myosin-1c and the hair-cell transduction apparatusR01DC006402 · NIDCD · WEST VIRGINIA UNIVERSITY · PI RAMAMURTHY, VISVANATHAN · 2004 to 2008
$1.5M
NCRR NIH HHS P20 RR015574NCRR NIH HHS P20RR015574NIDCD NIH HHS P30 DC004665NIDCD NIH HHS P30DC04665NIDCD NIH HHS R01 DC000200NIDCD NIH HHS R01DC00200NIDCD NIH HHS R01 DC006283NIDCD NIH HHS R01DC006283NIDCD NIH HHS R01 DC006402NIDCD NIH HHS R01DC006402Wellcome Trust
6 · The paper itself

Abstract

Hair cells, the mechanosensitive receptor cells of the inner ear, are critical for our senses of hearing and balance. The small number of these receptor cells in the inner ear has impeded the identification and characterization of proteins important for hair cell function. The binding specificity of monoclonal antibodies provides a means for identifying hair cell-specific proteins and isolating them for further study. We have generated a monoclonal antibody, termed hair cell soma-1 (HCS-1), which specifically immunolabels hair cells in at least five vertebrate classes, including sharks and rays, bony fish, amphibians, birds, and mammals. We used HCS-1 to immunoprecipitate the cognate antigen and identified it as otoferlin, a member of the ferlin protein family. Mutations in otoferlin underlie DFNB9, a recessive, nonsyndromic form of prelingual deafness characterized as an auditory neuropathy. Using immunocytochemistry, we find that otoferlin is associated with the entire basolateral membrane of the hair cells and with vesicular structures distributed throughout most of the hair cell cytoplasm. Biochemical assays indicate that otoferlin is tightly associated with membranes, as it is not solubilized by alterations in calcium or salt concentrations. HCS-1 immunolabeling does not co-localize with ribeye, a constituent of synaptic ribbons, suggesting that otoferlin may, in addition to its proposed function in synaptic vesicle release, play additional roles in hair cells.

Indexed as

Amino Acid SequenceAnimalsAntibodies, MonoclonalChickensDeafnessDogfishGerbillinaeGuinea PigsHair Cells, Auditory, InnerMembrane ProteinsModels, AnimalMolecular Sequence DataMutationRana catesbeianaSynaptic VesiclesZebrafishAntibodies, MonoclonalMembrane Proteins

Identifiers

PMID20809368
PMCPMC2975885
OpenAlexW1972105564

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.