Evidence map›Paper›PMID 20805475›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2010

Elr-type proteins protect Xenopus Dead end mRNA from miR-18-mediated clearance in the soma.

Katja Koebernick, Jana Loeber, Patrick Kobina Arthur, Katsiaryna Tarbashevich, Tomas Pieler

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 44 citations in OpenAlex.

  1. RNA localization during early development of the axolotl.Frontiers in cell and developmental biology · 2023
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  2. Review
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  7. Maternal Dead-end 1 promotes translation ofDevelopment (Cambridge, England) · 2017
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Katja KoebernickDepartment of Developmental Biochemistry, Göttingen Center for Molecular Biosciences, University of Göttingen, D-37077 Göttingen, Germany.
Jana Loeber
Patrick Kobina Arthur
Katsiaryna Tarbashevich
Tomas Pieler
University of Göttingen · DEUniversity of Ghana · GH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Segregation of the future germ line defines a crucial cell fate decision during animal development. In Xenopus, germ cells are specified by inheritance of vegetally localized maternal determinants, including a group of specific mRNAs. Here, we show that the vegetal localization elements (LE) of Xenopus Dead end (XDE) and of several other germ-line-specific, vegetally localized transcripts mediate germ cell-specific stabilization and somatic clearance of microinjected reporter mRNA in Xenopus embryos. The part of XDE-LE critical for somatic RNA clearance exhibits homology to zebrafish nanos1 and appears to be targeted by Xenopus miR-18 for somatic mRNA clearance. Xenopus Elr-type proteins of the vegetal localization complex can alleviate somatic RNA clearance of microinjected XDE-LE and endogenous XDE mRNA. ElrB1 synergizes with Xenopus Dead end protein in the stabilization of XDE-LE mRNA. Taken together, our findings unveil a functional link of vegetal mRNA localization and the protection of germ-line mRNAs from somatic clearance.

Indexed as

AnimalsBase SequenceELAV-Like Protein 2Embryo, NonmammalianFemaleGene Expression Regulation, DevelopmentalGenes, ReporterGerm CellsMicroRNAsRibonucleoproteinsRNA-Binding ProteinsRNA, MessengerTranscription, GeneticXenopus laevisXenopus ProteinsDnd1 protein, XenopusELAVL1 protein, Xenopuselavl2 protein, XenopusELAV-Like Protein 2MicroRNAsRibonucleoproteinsRNA-Binding ProteinsRNA, MessengerXenopus Proteins

Identifiers

PMID20805475
PMCPMC2941339
OpenAlexW2083462333

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.