Evidence map›Paper›PMID 20805355›Full record

ArticleMolecular and cellular biology2010

Inhibition of human peptide deformylase disrupts mitochondrial function.

Sindy Escobar-Alvarez, Jeffrey Gardner, Aneesh Sheth, Giovanni Manfredi, Guangli Yang, Ouathek Ouerfelli, Mark L Heaney, David A Scheinberg

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 48 citations in OpenAlex.

  1. Trial
  2. Review
  3. Vacuolar-type HNature communications · 2025
    Article
  4. Hypoxia-induced tRF-3Frontiers in pharmacology · 2025
    Article
  5. Article
  6. Review
  7. Article
  8. Mechanisms and regulation of protein synthesis in mitochondria.Nature reviews. Molecular cell biology · 2021
    Review
  9. Review
  10. Maternally inherited peptides as strain-specific chemosignals.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  11. Article
  12. Article
  13. Mitochondrial ribosomes in cancer.Seminars in cancer biology · 2017
    Review
  14. Article
  15. Article
  16. Article
  17. Integrating mitochondrial translation into the cellular context.Nature reviews. Molecular cell biology · 2015
    Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Sindy Escobar-AlvarezMolecular Pharmacology and Chemistry, Sloan-Kettering Institute, New York, NY 10065, USA.
Jeffrey Gardner
Aneesh Sheth
Giovanni Manfredi
Guangli Yang
Ouathek Ouerfelli
Mark L Heaney
David A Scheinberg
Cornell University · USKettering University · USMemorial Sloan Kettering Cancer Center · US

Funding

RECOMBINANT ANTICD33 ANTIBODY FOR AMLR01CA055349 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI SCHEINBERG, DAVID A · 1991 to 2020
$6.8M
NCI NIH HHS CA 55349NCI NIH HHS R01 CA055349
6 · The paper itself

Abstract

Deformylases are metalloproteases in bacteria, plants, and humans that remove the N-formyl-methionine off peptides in vitro. The human homolog of peptide deformylase (HsPDF) resides in the mitochondria, along with its putative formylated substrates; however, the cellular function of HsPDF remains elusive. Here we report on the function of HsPDF in mitochondrial translation and oxidative phosphorylation complex biogenesis. Functional HsPDF appears to be necessary for the accumulation of mitochondrial DNA-encoded proteins and assembly of new respiratory complexes containing these proteins. Consequently, inhibition of HsPDF reduces respiratory function and cellular ATP levels, causing dependence on aerobic glycolysis for cell survival. A series of structurally different HsPDF inhibitors and control peptidase inhibitors confirmed that inhibition of HsPDF decreases mtDNA-encoded protein accumulation. Therefore, HsPDF appears to have a role in maintenance of mitochondrial respiratory function, and this function is analogous to that of chloroplast PDF.

Indexed as

Adenosine TriphosphateAmidohydrolasesCell LineDNA, MitochondrialElectron Transport Chain Complex ProteinsEnzyme InhibitorsGlycolysisHumansMitochondriaMitochondrial ProteinsOxidative PhosphorylationProtein BiosynthesisAdenosine TriphosphateAmidohydrolasesDNA, MitochondrialElectron Transport Chain Complex ProteinsEnzyme InhibitorsMitochondrial Proteinspeptide deformylase

Identifiers

PMID20805355
PMCPMC2953058
OpenAlexW2159292839

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.