Evidence map›Paper›PMID 20804210›Full record

ArticleBiomacromolecules2010

Nanometer to millimeter scale peptide-porphyrin materials.

Daniil V Zaytsev, Fei Xie, Madhumita Mukherjee, Alexey Bludin, Borries Demeler, Robert M Breece, David L Tierney, Michael Y Ogawa

Abstract read
In one paragraph

Article in Biomacromolecules, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 22 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Daniil V ZaytsevDepartment of Chemistry and Center for Photochemical Sciences, Bowling Green State University, Bowling Green, OH 43403, USA.
Fei Xie
Madhumita Mukherjee
Alexey Bludin
Borries Demeler
Robert M Breece
David L Tierney
Michael Y Ogawa
Miami University · USThe University of Texas Health Science Center at San Antonio · USBowling Green State University · US

Funding

Case Center for Synchrotron BiosciencesP30EB009998 · NIBIB · CASE WESTERN RESERVE UNIVERSITY · PI CHANCE, MARK R · 2009 to 2018
$8.4M
UltraScan Software Maintenance and DevelopmentR01RR022200 · NCRR · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI DEMELER, BORRIES · 2007 to 2010
$1.7M
NCRR NIH HHS R01 RR022200NCRR NIH HHS RR022200NIBIB NIH HHS P30 EB009998
6 · The paper itself

Abstract

AQ-Pal14 is a 30-residue polypeptide that was designed to form an α-helical coiled coil that contains a metal-binding 4-pyridylalanine residue on its solvent-exposed surface. However, characterization of this peptide shows that it exists as a three-stranded coiled coil, not a two-stranded one as predicted from its design. Reaction with cobalt(III) protoporphyrin IX (Co-PPIX) produces a six-coordinate Co-PPIX(AQ-Pal14)(2) species that creates two coiled-coil oligomerization domains coordinated to opposite faces of the porphyrin ring. It is found that this species undergoes a buffer-dependent self-assembly process: nanometer-scale globular materials were formed when these components were reacted in unbuffered H(2)O, while millimeter-scale, rod-like materials were prepared when the reaction was performed in phosphate buffer (20 mM, pH 7). It is suggested that assembly of the globular material is dictated by the conformational properties of the coiled-coil forming AQ-Pal14 peptide, whereas that of the rod-like material involves interactions between Co-PPIX and phosphate ion.

Indexed as

BuffersChromatography, GelCircular DichroismHydrogen-Ion ConcentrationMicroscopy, Atomic ForceMicroscopy, Electron, ScanningModels, MolecularNanostructuresPeptidesProtein ConformationProtoporphyrinsSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationSpectrophotometry, InfraredSpectrum Analysis, RamanSurface PropertiesUltracentrifugationBufferscobaltiprotoporphyrinPeptidesProtoporphyrins

Identifiers

PMID20804210
PMCPMC2952671
OpenAlexW2151158434

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.