Evidence map›Paper›PMID 20802500›Full record

ArticleNature medicine2010

Clinical microfluidics for neutrophil genomics and proteomics.

Kenneth T Kotz, Wenzong Xiao, Carol Miller-Graziano, Wei-Jun Qian, Aman Russom, Elizabeth A Warner, Lyle L Moldawer, Asit De, Paul E Bankey, Brianne O Petritis and 14 more

3 registry-linked trialsOpen access · greenAbstract read
In one paragraph

Article in Nature medicine, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to 3 registered trials, which are not on this map. Cited by 86 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed, 1 pooled it
9.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00257231 completednot on this map

Inflammation and the Host Response to Injury

TypeobservationalSponsorMassachusetts General HospitalRan2003 to 2018Enrolled610ConditionsTrauma, Burns, Multiple Organ Failure
NCT00257244 completednot on this map

Inflammation and the Host Response to Injury

TypeobservationalSponsorMassachusetts General HospitalRan2004 to 2018Enrolled280ConditionsTrauma, Burns, Multiple Organ Failure
NCT02776111 terminatednot on this mapstarted 2016, after this paper: background citation

The Use of Microfluidics and Transcriptomics to Implement Precision Medicine in Post Solid Organ Transplant Patients

TypeobservationalSponsorUniversity of FloridaRan2016 to 2019Enrolled7ConditionsImmunosuppressionArmsBlood Sample
3 · Its place in the literature

Who cites it

86 citing papers in PubMed, 1 synthesis or guideline pooled it, 160 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Microfluidic devices for neutrophil chemotaxis studies.Journal of translational medicine · 2020
    Review
  9. Assaying leukocyte hallmarks during sepsis.Nature biomedical engineering · 2019
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Review
  17. Article
  18. Article
  19. Resolvin D2 Limits Secondary Tissue Necrosis After Burn Wounds in Rats.Journal of burn care & research : official publication of the American Burn Association · 2018
    Article
  20. The Adhesion G Protein-Coupled Receptor GPR97/Frontiers in immunology · 2018
    Article

26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 9 institutions in 1 country.

Kenneth T KotzDepartment of Surgery, Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts, USA. kkotz@partners.org
Wenzong Xiao
Carol Miller-Graziano
Wei-Jun Qian
Aman Russom
Elizabeth A Warner
Lyle L Moldawer
Asit De
Paul E Bankey
Brianne O Petritis
David G Camp
Alan E Rosenbach
Jeremy Goverman
Shawn P Fagan
Bernard H Brownstein
Daniel Irimia
Weihong Xu
Julie Wilhelmy
Michael N Mindrinos
Richard D Smith
Ronald W Davis
Ronald G Tompkins
Mehmet Toner
Inflammation and the Host Response to Injury Collaborative Research Program
Harvard University · USMassachusetts General Hospital · USPacific Northwest National Laboratory · USUniversity of Rochester · USEnvironmental Molecular Sciences Laboratory · USFlorida College · USShriners Hospitals for Children - Erie · USUniversity of Florida · USWashington University in St. Louis · US

Funding

WHOLE YEAST GENOME TRANSCRIPTIONAL AND FUNCTIONAL GENE MAPS--A FEASIBILITY STUDYP01HG000205 · NHGRI · STANFORD UNIVERSITY · PI DAVIS, RONALD WAYNE, HOWE, ROGER THOMAS · 1990 to 2016
$120.9M
Inflammation and the Response to InjuryU54GM062119 · NIGMS · MASSACHUSETTS GENERAL HOSPITAL · PI TOMPKINS, RONALD GARY · 2001 to 2010
$78.6M
WORKSHOP AND TRAINING ACTIVITIESP41RR018522 · NCRR · BATTELLE PACIFIC NORTHWEST LABORATORIES · PI SMITH, RICHARD D · 2003 to 2011
$25.1M
Bio-MicroElectroMechanical Systems Resource CenterP41EB002503 · NIBIB · MASSACHUSETTS GENERAL HOSPITAL · PI TONER, MEHMET · 2004 to 2018
$17.4M
Is Aberrant MO Stimulation Pivotal in Post-Trauma MODS?R01GM036214 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI MILLER-GRAZIANO, CAROL L. · 1986 to 2012
$4.3M
TRAINING IN BURNS AND TRAUMA RESEARCHT32GM007035 · NIGMS · MASSACHUSETTS GENERAL HOSPITAL · PI TOMPKINS, RONALD GARY · 1985 to 2014
$3.5M
REGULATION ON MONOKINE PRODUCTION IN TRAUMA AND SURGERYR01GM040586 · NIGMS · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI MOLDAWER, LYLE L · 1988 to 2016
$2.6M
Detection/Dysplastic Epithelium/Gastrointestinal TractR33CA094304 · NCI · UNIVERSITY HOSPITALS OF CLEVELAND · PI SIVAK, MICHAEL V · 2002 to 2004
$1.5M
NCI NIH HHS R33 CA094304NCRR NIH HHS P41 RR018522NHGRI NIH HHS P01 HG000205NIBIB NIH HHS P41 EB-002503NIBIB NIH HHS P41 EB002503NIGMS NIH HHS R01 GM036214NIGMS NIH HHS R01 GM040586NIGMS NIH HHS R01-GM-36214NIGMS NIH HHS T32 GM007035NIGMS NIH HHS T32 GM-007035-32NIGMS NIH HHS U54 GM-062119NIGMS NIH HHS U54 GM062119
6 · The paper itself

Abstract

Neutrophils have key roles in modulating the immune response. We present a robust methodology for rapidly isolating neutrophils directly from whole blood with 'on-chip' processing for mRNA and protein isolation for genomics and proteomics. We validate this device with an ex vivo stimulation experiment and by comparison with standard bulk isolation methodologies. Last, we implement this tool as part of a near-patient blood processing system within a multi-center clinical study of the immune response to severe trauma and burn injury. The preliminary results from a small cohort of subjects in our study and healthy controls show a unique time-dependent gene expression pattern clearly demonstrating the ability of this tool to discriminate temporal transcriptional events of neutrophils within a clinical setting.

Indexed as

Antibodies, MonoclonalAntigens, CDBiotinylationBurnsCell Adhesion MoleculesDNAGenomicsGPI-Linked ProteinsHumansMicrofluidicsNeutrophilsOligonucleotide Array Sequence AnalysisProteomicsRNAWounds and InjuriesAntibodies, MonoclonalAntigens, CDCEACAM8 protein, humanCell Adhesion MoleculesDNAGPI-Linked ProteinsRNA

Identifiers

PMID20802500
PMCPMC3136804
OpenAlexW2087318775

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.