Evidence map›Paper›PMID 20800257›Full record

ArticleVirology2010

The rate of hepatitis C virus infection initiation in vitro is directly related to particle density.

Ali Sabahi, Katherine A Marsh, Harel Dahari, Peter Corcoran, Jennifer M Lamora, Xuemei Yu, Robert F Garry, Susan L Uprichard

Abstract read
In one paragraph

Article in Virology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
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  5. Review
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  7. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Ali SabahiDepartment of Microbiology and Immunology, Tulane University Health Sciences Center, New Orleans, LA, USA.
Katherine A Marsh
Harel Dahari
Peter Corcoran
Jennifer M Lamora
Xuemei Yu
Robert F Garry
Susan L Uprichard

Funding

UNM COBRE: THEORETICAL STUDY OF SPECIFICITY OF RNA SILENCING MECHANISMP20RR018754 · NCRR · UNIVERSITY OF NEW MEXICO · PI LOKER, ERIC SAMUEL · 2003 to 2011
$16.7M
Antibody immunotherapeutics for biodefense against Lassa virusR01AI104621 · NIAID · TULANE UNIVERSITY OF LOUISIANA · PI GARRY, ROBERT F · 2013 to 2017
$5.8M
High Throughput in vitro Hepatitis C Virus ScreeningR01AI070827 · NIAID · UNIVERSITY OF ILLINOIS AT CHICAGO · PI UPRICHARD, SUSAN L. · 2006 to 2009
$887k
HIV-1 Tat modulation of HCV replication and pathogenesisR21DK070551 · NIDDK · TULANE UNIVERSITY OF LOUISIANA · PI GARRY, ROBERT F · 2005 to 2006
$440k
Development of real time fluorescence-based assays for elucidating HCV entry dynaR03AI085226 · NIAID · UNIVERSITY OF ILLINOIS AT CHICAGO · PI UPRICHARD, SUSAN L. · 2010 to 2011
$156k
NCRR NIH HHS P20-RR18754NIAID NIH HHS R01 AI070827NIAID NIH HHS R01-AI070827NIAID NIH HHS R01 AI104621NIAID NIH HHS R03 AI085226NIAID NIH HHS R03-AI085226NIDDK NIH HHS R21 DK070551NIDDK NIH HHS R21-DK070551
6 · The paper itself

Abstract

To gain a more complete understanding of hepatitis C virus (HCV) entry, we initially assessed the rate at which HCV initiates productive attachment/infection in vitro and discovered it to be slower than most viruses. Since HCV, including cell culture-derived HCV (HCVcc), exhibits a broad-density profile (1.01-1.16 g/ml), we hypothesized that the varying densities of the HCVcc particles present in the inoculum may be responsible for this prolonged entry phenotype. To test this hypothesis, we show that during infection, particles of high density disappeared from the viral inoculum sooner and initiated productive infection faster than virions of low density. Moreover, we could alter the rate of attachment/infection initiation by increasing or decreasing the density of the cell culture medium. Together, these findings demonstrate that the relationship between the density of HCVcc and the density of the extracellular milieu can significantly impact the rate at which HCVcc productively interacts with target cells in vitro.

Indexed as

Virus InternalizationCell LineCentrifugation, Density GradientCulture MediaHepacivirusHepatocytesHumansViral LoadCulture Media

Identifiers

PMID20800257
PMCPMC2946418

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.