Evidence map›Paper›PMID 20799790›Full record

ArticleJournal of biomedical optics

Quantitative tool for rapid disease mapping using optical coherence tomography images of azoxymethane-treated mouse colon.

Amy M Winkler, Photini F S Rice, Rebekah A Drezek, Jennifer K Barton

Open access · bronzeAbstract read
In one paragraph

Article in Journal of biomedical optics. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 30 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Amy M WinklerUniversity of Arizona, College of Optical Sciences, Tucson, Arizona 85721-0240, USA. awinkler@optics.arizona.edu
Photini F S Rice
Rebekah A Drezek
Jennifer K Barton
University of Arizona · US

Funding

Dual-Modality System for Imaging Colon Cancer in MiceR01CA109385 · NCI · UNIVERSITY OF ARIZONA · PI BARTON, JENNIFER KEHLET · 2004 to 2013
$3.1M
NCI NIH HHS R01 CA109385NCI NIH HHS R01 CA109835
6 · The paper itself

Abstract

Optical coherence tomography (OCT) can provide new insight into disease progression and therapy by enabling nondestructive, serial imaging of in vivo cancer models. In previous studies, we have shown the utility of endoscopic OCT for identifying adenomas in the azoxymethane-treated mouse model of colorectal cancer and tracking disease progression over time. Because of improved imaging speed made possible through Fourier domain imaging, three-dimensional imaging of the entire mouse colon is possible. Increased amounts of data can facilitate more accurate classification of tissue but require more time on the part of the researcher to sift through and identify relevant data. We present quantitative software for automatically identifying potentially diseased areas that can be used to create a two-dimensional "disease map" from a three-dimensional Fourier domain OCT data set. In addition to sensing inherent changes in tissue that occur during disease development, the algorithm is sensitive to exogeneous highly scattering gold nanoshells that can be targeted to disease biomarkers. The results of the algorithm were compared to histological diagnosis. The algorithm was then used to assess the ability of gold nanoshells targeted to epidermal growth factor receptor in vivo to enable functional OCT imaging.

Indexed as

AlgorithmsAzoxymethaneAnimalsColonic NeoplasmsImage EnhancementImage Interpretation, Computer-AssistedImaging, Three-DimensionalMicePattern Recognition, AutomatedReproducibility of ResultsSensitivity and SpecificitySoftwareTomography, Optical CoherenceAzoxymethane

Identifiers

PMID20799790
PMCPMC2912936
OpenAlexW2080496739

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.