Evidence map›Paper›PMID 20795789›Full record

ArticleLeukemia & lymphoma2010

Acute myeloid leukemia is characterized by Wnt pathway inhibitor promoter hypermethylation.

Elizabeth A Griffiths, Steven D Gore, Craig Hooker, Michael A McDevitt, Judith E Karp, B Douglas Smith, Helai P Mohammad, Ying Ye, James G Herman, Hetty E Carraway

Abstract read
In one paragraph

Article in Leukemia & lymphoma, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 78 citations in OpenAlex.

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  4. Transcriptomic Context ofBiomedicines · 2023
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  9. Concurrent Evaluation of the Expression and Methylation ofIranian journal of medical sciences · 2021
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  10. Bimodal expression ofEJHaem · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Elizabeth A GriffithsSidney Kimmel Comprehensive Cancer Center at Johns Hopkins, Baltimore, MD 21231, USA.
Steven D Gore
Craig Hooker
Michael A McDevitt
Judith E Karp
B Douglas Smith
Helai P Mohammad
Ying Ye
James G Herman
Hetty E Carraway
Sidney Kimmel Comprehensive Cancer Center · USJohns Hopkins University · US

Funding

Targeting Epigenomics in Myeloid NeoplasmsK24CA111717 · NCI · YALE UNIVERSITY · PI GORE, STEVEN D · 2005 to 2015
$1.7M
NCI NIH HHS CA06793NCI NIH HHS K24 CA111717
6 · The paper itself

Abstract

Nuclear localization of non-phosphorylated, active beta-catenin is a measure of Wnt pathway activation and is associated with adverse outcome in patients with acute myeloid leukemia (AML). While genetic alterations of the Wnt pathway are infrequent in AML, inhibitors of this pathway are silenced by promoter methylation in other malignanices. Leukemia cell lines were examined for Wnt pathway inhibitor methylation and total beta-catenin levels, and had frequent methylation of Wnt inhibitors and upregulated beta-catenin by Western blot and immunofluorescence. One hundred sixty-nine AML samples were examined for methylation of Wnt inhibitor genes. Diagnostic samples from 72 patients with normal cytogenetics who received standard high-dose induction chemotherapy were evaluated for associations between methylation and event-free or overall survival. Extensive methylation of Wnt pathway inhibitor genes was observed in cell lines, and 89% of primary AML samples had at least one methylated gene: DKK1 (16%), DKK3 (8%), RUNX3 (27%), sFRP1 (34%), sFRP2 (66%), sFRP4 (9%), sFRP5 (54%), SOX17 (29%), and WIF1 (32%). In contrast to epithelial tumors, methylation of APC (2%) and RASSF1A (0%) was rare. In patients with AML with normal cytogenetics, sFRP2 and sFRP5 methylation at the time of diagnosis was associated with an increased risk of relapse, and sFRP2 methylation was associated with an increased risk for death. In patients with AML: (a) there is a high frequency of Wnt pathway inhibitor methylation; (b) Wnt pathway inhibitor methylation is distinct from that observed in epithelial malignancies; and (c) methylation of sFRP2 and sFRP5 may predict adverse clinical outcome in patients with normal karyotype AML.

Indexed as

DNA MethylationAdaptor Proteins, Signal TransducingAgedBlotting, WesternCell Line, TumorCohort StudiesEye ProteinsFemaleFluorescent Antibody TechniqueHumansKaryotypingLeukemia, Myeloid, AcuteMaleMembrane ProteinsMiddle AgedNeoplasm ProteinsAdaptor Proteins, Signal TransducingEye ProteinsMembrane ProteinsNeoplasm ProteinsSecreted Frizzled-Related ProteinsSFRP2 protein, humanSFRP5 protein, humanWnt Proteins

Identifiers

PMID20795789
PMCPMC4000011
OpenAlexW2054789230

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.