Evidence map›Paper›PMID 20739610›Full record

ArticlePlant physiology2010

SHORT-ROOT and SCARECROW regulate leaf growth in Arabidopsis by stimulating S-phase progression of the cell cycle.

Stijn Dhondt, Frederik Coppens, Freya De Winter, Kamal Swarup, Roeland M H Merks, Dirk Inzé, Malcolm J Bennett, Gerrit T S Beemster

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed, 1 pooled it
10.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 1 synthesis or guideline pooled it, 115 citations in OpenAlex.

  1. Pooled it
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  14. (Don't) Look Up!: IsFrontiers in plant science · 2022
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  19. Plant direct · 2020
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  20. The Arabidopsis Hypoxia InducibleNon-coding RNA · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 3 countries.

Stijn DhondtDepartment of Plant Systems Biology, Flanders Institute for Biotechnology, Ghent, Belgium.
Frederik Coppens
Freya De Winter
Kamal Swarup
Roeland M H Merks
Dirk Inzé
Malcolm J Bennett
Gerrit T S Beemster
Vlaams Instituut voor Biotechnologie · BECentrum Wiskunde & Informatica · NLGhent University · BEUniversity of Antwerp · BEUniversity of Nottingham · GB

Funding

Biotechnology and Biological Sciences Research Council BB/G023972/1
6 · The paper itself

Abstract

SHORT-ROOT (SHR) and SCARECROW (SCR) are required for stem cell maintenance in the Arabidopsis (Arabidopsis thaliana) root meristem, ensuring its indeterminate growth. Mutation of SHR and SCR genes results in disorganization of the quiescent center and loss of stem cell activity, resulting in the cessation of root growth. This paper reports on the role of SHR and SCR in the development of leaves, which, in contrast to the root, have a determinate growth pattern and lack a persistent stem cell niche. Our results demonstrate that inhibition of leaf growth in shr and scr mutants is not a secondary effect of the compromised root development but is caused by an effect on cell division in the leaves: a reduced cell division rate and early exit of the proliferation phase. Consistent with the observed cell division phenotype, the expression of SHR and SCR genes in leaves is closely associated with cell division activity in most cell types. The increased cell cycle duration is due to a prolonged S-phase duration, which is mediated by up-regulation of cell cycle inhibitors known to restrain the activity of the transcription factor, E2Fa. Therefore, we conclude that, in contrast to their specific roles in cortex/endodermis differentiation and stem cell maintenance in the root, SHR and SCR primarily function as general regulators of cell proliferation in leaves.

Indexed as

S PhaseArabidopsisArabidopsis ProteinsCell DivisionGene Expression Regulation, PlantMutationOligonucleotide Array Sequence AnalysisPlant LeavesPlant RootsRNA, PlantTranscription FactorsArabidopsis ProteinsRNA, PlantSCR protein, ArabidopsisSHORT ROOT protein, ArabidopsisTranscription Factors

Identifiers

PMID20739610
PMCPMC2971598
OpenAlexW2162417910

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.