Evidence map›Paper›PMID 20737482›Full record

ArticleGenes, chromosomes & cancer2010

Identification of novel carcinogen-mediated mammary tumor susceptibility loci in the rat using the chromosome substitution technique.

Tatjana Adamovic, Donna McAllister, Tao Wang, Dragan Adamovic, J Jordi Rowe, Carol Moreno, Josef Lazar, Howard J Jacob, Sonia L Sugg

Open access · bronzeAbstract read
In one paragraph

Article in Genes, chromosomes & cancer, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Mapping genetic modifiers of radiation-induced cardiotoxicity to rat chromosome 3.American journal of physiology. Heart and circulatory physiology · 2019
    Article
  5. Article
  6. Mapping Mammary Tumor Traits in the Rat.Methods in molecular biology (Clifton, N.J.) · 2019
    Review
  7. Article
  8. The emerging role for rat models in gene discovery.Mammalian genome : official journal of the International Mammalian Genome Society · 2011
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 2 countries.

Tatjana AdamovicDepartment of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden. tatjana.adamovic@ki.se
Donna McAllister
Tao Wang
Dragan Adamovic
J Jordi Rowe
Carol Moreno
Josef Lazar
Howard J Jacob
Sonia L Sugg
Medical College of Wisconsin · USCleveland Clinic · USIn-Q-Tel · USKarolinska Institutet · SEÖrebro University · SEUniversity of Iowa · US

Funding

PHYSIOGENOMICS OF STRESSORS IN DERIVED CONSOMIC RATSU01HL066579 · NHLBI · MEDICAL COLLEGE OF WISCONSIN · PI JACOB, HOWARD J · 2000 to 2007
$26.6M
Research ServicesP01HL082798 · NHLBI · MEDICAL COLLEGE OF WISCONSIN · PI GREENE, ANDREW S. · 2006 to 2015
$22.0M
Genetic and Cellular Basis of Resistance/Sensitivity to Myocardial IschemiaR01HL089930 · NHLBI · MEDICAL COLLEGE OF WISCONSIN · PI JACOB, HOWARD J · 2009 to 2012
$2.3M
NHLBI NIH HHS P01 HL082798NHLBI NIH HHS P01HL082798NHLBI NIH HHS R01 HL089930NHLBI NIH HHS R01HL089930NHLBI NIH HHS U01 HL066579NHLBI NIH HHS U01HL066579
6 · The paper itself

Abstract

We here report the genetic basis for susceptibility and resistance to carcinogen-mediated [7,12-dimethylbenz[a]anthracene (DMBA)] mammary tumorigenesis using the full panel of SS/BN consomic rat strains, in which substitutions of individual chromosomes from the resistant BN strain onto the genomic background of the susceptible SS strain were made. Analysis of 252 consomic females identified rat mammary Quantitative Trait Loci (QTLs) affecting tumor incidence on chromosomes 3 and 5, latency on chromosomes 3, 9, 14, and 19, and multiplicity on chromosomes 13, 16, and 19. In addition, we unexpectedly identified a novel QTL on chromosome 6 controlling a lethal toxic phenotype in response to DMBA. Upon further investigation with chromosomes 6 and 13 congenic lines, in which an additional 114 rats were investigated, we mapped (1) a novel mammary tumor QTL to a region of 27.1 Mbp in the distal part of RNO6, a region that is entirely separated from the toxicity phenotype, and (2) a novel and powerful mammary tumor susceptibility locus of 4.5 Mbp that mapped to the proximal q-arm of RNO13. Comparison of genetic strain differences using existing rat genome databases enabled us to further construct priority lists containing single breast cancer candidate genes within the defined QTLs, serving as potential functional variants for future testing.

Indexed as

Chromosome MappingGenetic Predisposition to Disease9,10-Dimethyl-1,2-benzanthraceneAnimalsCarcinogensFemaleMammary Neoplasms, ExperimentalPolymorphism, Single NucleotideQuantitative Trait LociRats9,10-Dimethyl-1,2-benzanthraceneCarcinogens

Identifiers

PMID20737482
PMCPMC2943010
OpenAlexW2043267509

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.