Evidence map›Paper›PMID 20737255›Full record

ArticleBiomolecular NMR assignments2011

Backbone 1H, 13C, 15N NMR assignments of the unliganded and substrate ternary complex forms of mevalonate diphosphate decarboxylase from Streptococcus pneumoniae.

Guido Reuther, Richard Harris, Mark Girvin, Thomas S Leyh

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In one paragraph

Article in Biomolecular NMR assignments, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 86% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Guido ReutherDepartment of Microbiology and Immunology, Albert-Einstein-College of Medicine of Yeshiva University, Bronx, NY 10461-1926, USA.
Richard Harris
Mark Girvin
Thomas S Leyh
Albert Einstein College of Medicine · USYeshiva University · US

Funding

The Mevalonate Pathway in StreptococcusR01AI068989 · NIAID · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI LEYH, THOMAS S. · 2006 to 2010
$2.7M
NIAID NIH HHS AI 068989NIAID NIH HHS R01 AI068989
6 · The paper itself

Abstract

Mevalonate diphosphate decarboxylase (MDD) catalyzes the ATP-dependent decarboxylation of diphosphomevalonate (DPM) to produce isopentenyl diphosphate (IPP), the molecular "building block" for more than 25,000 distinct isoprenoids, including cholesterol, steroid hormones and terpenoids. Here, we present the first backbone assignment of Streptococcus pneumoniae MDD in the unliganded state and in a ternary complex with DPM and AMPPCP--a nucleotide analogue unable to transfer the γ-phosphoryl group. The secondary chemical shifts for the unliganded form are in good agreement with the crystal structure of Streptococcus pyogenes (~70% sequence identity). The addition of substrate and nucleotide to the enzyme results in chemical shift changes of cross peaks that correspond to residues in the binding pocket.

Indexed as

Nuclear Magnetic Resonance, BiomolecularCarbon IsotopesCarboxy-LyasesHydrogenLigandsNitrogen IsotopesProtein Structure, SecondaryStreptococcus pneumoniaeSubstrate SpecificityCarbon IsotopesCarboxy-LyasesHydrogenLigandsNitrogen Isotopespyrophosphomevalonate decarboxylase

Identifiers

PMID20737255
PMCPMC3245623
OpenAlexW2133233158

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.