Evidence map›Paper›PMID 20734393›Full record

ArticleInternational journal of cancer2011

Upregulation of TRAG3 gene in urothelial carcinoma of the bladder.

Jose A Karam, Sandra Huang, Jinhai Fan, Jennifer Stanfield, Roger A Schultz, Rey-Chen Pong, Xiankai Sun, Ralph P Mason, Xian-Jin Xie, Gang Niu and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in International journal of cancer, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 3 countries.

Jose A KaramDepartment of Urology, University of Texas Southwestern Medical Center, Dallas, TX 75390-9110, USA.
Sandra Huang
Jinhai Fan
Jennifer Stanfield
Roger A Schultz
Rey-Chen Pong
Xiankai Sun
Ralph P Mason
Xian-Jin Xie
Gang Niu
Xiaoyuan Chen
Eugene P Frenkel
Arthur I Sagalowsky
Jer-Tsong Hsieh
The University of Texas Southwestern Medical Center · USStanford Medicine · USChina Medical University Hospital · TWFirst Affiliated Hospital of Xi'an Jiaotong University · CN

Funding

Laboratory of Molecular Imaging and NanomedicineZIAEB000073 · NIBIB · NATIONAL INSTITUTE OF BIOMEDICAL IMAGING AND BIOENGINEERING · PI CHEN, XIAOYUAN · 2010 to 2020
$32.8M
UT Southwestern Small Animal Imaging ResourceU24CA126608 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI MASON, RALPH P., SHERRY, DEAN · 2007 to 2011
$2.3M
The role of CAR and its application in bladder cancerR01CA095730 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI HSIEH, JER-TSONG · 2003 to 2006
$1.1M
NCI NIH HHS CA95730NCI NIH HHS R01 CA095730NCI NIH HHS U24 CA126608NCI NIH HHS U24CA126608
6 · The paper itself

Abstract

Conventional chemotherapy is commonly used for advanced stages of bladder cancer with modest success and high morbidity. Identifying markers of resistance will allow clinicians to tailor treatment to a specific patient population. T24-tumorigenic cell line was grown orthotopically in nude mice and monitored using bioluminescence imaging and microcomputed tomography until they developed metastases. Stable sublines were then developed from primary bladder (T24-P), lung (T24-L) and bone (T24-B) tissues. Chromosomal analysis and DNA microarray were used to characterize these sublines. Real-time quantitative polymerase chain reaction and immunohistochemistry were used for validation. Epigenetic modifiers were used to study gene regulation. The cell viability was quantified with MTT assay. Chromosomal analysis revealed multiple alterations in metastatic cell lines compared to T24-P. DNA microarray analysis showed that taxol resistance-associated gene (TRAG) 3 was the most upregulated gene. From real-time quantitative polymerase chain reaction and immunohistochemistry, TRAG3 was significantly higher in T24-L and T24-B than T24-P. TRAG3 gene expression is likely controlled by DNA methylation but not histone acetylation. Interestingly, T24-B and T24-L cells were more resistant than T24-P to treatment with antimicrotubule agents such as docetaxel, paclitaxel and vinblastine. TRAG3 mRNA expression was higher in 20% of patients with ≤ pT2 (n = 10) and 60% of patients with ≥ pT3 (n = 20) compared to normal adjacent tissue (p = 0.05). In addition, the median TRAG3 expression was 6.7-fold higher in ≥ pT3 tumors compared to ≤ pT2 tumors. Knowing the status of TRAG3 expression could help clinicians tailor treatment to a particular patient population that could benefit from treatment, while allocating patients with resistant tumors to new experimental therapies.

Indexed as

Up-RegulationAdultAgedAged, 80 and overAnimalsBase SequenceCarcinoma, Transitional CellDNA PrimersFemaleHumansMaleMiceMice, NudeMiddle AgedNeoplasm MetastasisNeoplasm ProteinsCSAG2 protein, humanDNA PrimersNeoplasm Proteins

Identifiers

PMID20734393
PMCPMC3082622
OpenAlexW2122237699

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.