Evidence map›Paper›PMID 20734064›Full record

ArticleHuman genetics2010

A large-scale candidate gene association study of age at menarche and age at natural menopause.

Chunyan He, Peter Kraft, Daniel I Chasman, Julie E Buring, Constance Chen, Susan E Hankinson, Guillaume Paré, Stephen Chanock, Paul M Ridker, David J Hunter

Open access · greenAbstract read
In one paragraph

Article in Human genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers, 8 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed, 8 pooled it
8.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 8 syntheses or guidelines pooled it, 136 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Genetic Variation and Hot Flashes: A Systematic Review.The Journal of clinical endocrinology and metabolism · 2020
    Pooled it
  4. Pooled it
  5. Guideline
  6. Pooled it
  7. Pooled it
  8. Pooled it
  9. Polymorphism of theLife (Basel, Switzerland) · 2026
    Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Maternal Age at Menarche Genes Determines Fetal Growth Restriction Risk.International journal of molecular sciences · 2024
    Article
  15. Journal of the Endocrine Society · 2023
    Article
  16. Article
  17. Review
  18. Sex Hormone Candidate Gene Polymorphisms Are Associated with Endometriosis.International journal of molecular sciences · 2022
    Article
  19. Article
  20. Article

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 1 country.

Chunyan HeDepartment of Public Health, Indiana University School of Medicine, Indianapolis, IN, USA. chunhe@iupui.edu
Peter Kraft
Daniel I Chasman
Julie E Buring
Constance Chen
Susan E Hankinson
Guillaume Paré
Stephen Chanock
Paul M Ridker
David J Hunter
Brigham and Women's Hospital · USHarvard University · USBoston University · USBroad Institute · USIndiana University School of MedicineNational Cancer Institute · US

Funding

Statistical MethodsP01CA087969 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI TWOROGER, SHELLEY S · 2000 to 2019
$77.8M
Women's Health Study: Continued Follow-upR01CA047988 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI BURING, JULIE E., LEE, I-MIN · 1991 to 2014
$28.2M
Pharmacogenomics and Risk of Cardiovascular DiseaseU01HL069757 · NHLBI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI KRAUSS, RONALD M · 2001 to 2009
$24.7M
Pharmacogenomics and Risk of Cardiovascular DiseaseU19HL069757 · NHLBI · CHILDREN'S HOSPITAL & RES CTR AT OAKLAND · PI KRAUSS, RONALD M · 2010 to 2014
$12.8M
Characterizing Genetic Susceptibility to Breast and Prostate Cancer; the BPC3U01CA098233 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI HUNTER, DAVID JOHN · 2003 to 2010
$10.8M
TRIAL OF VITAMIN E, BETA-CAROTENE &ASPRIN IN WOMENR01HL043851 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI BURING, JULIE E · 1991 to 2000
$1.6M
PROSPECTIVE STUDY OF DIET AND CANCER IN WOMENR01CA040356 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI SPEIZER, FRANK E · 1985 to 2000
$824k
PROSPECTIVE STUDY OF DIET AND CANCER IN WOMENR37CA040356 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI SPEIZER, FRANK E · 1987 to 1994
–
NCI NIH HHS CA 047988NCI NIH HHS CA 40356NCI NIH HHS CA 87969NCI NIH HHS P01 CA087969NCI NIH HHS R01 CA040356NCI NIH HHS R01 CA047988NCI NIH HHS U01 CA098233NCI NIH HHS U01-CA98233NHLBI NIH HHS HL 043851NHLBI NIH HHS HL69757NHLBI NIH HHS R01 HL043851NHLBI NIH HHS U01 HL069757NHLBI NIH HHS U19 HL069757
6 · The paper itself

Abstract

Recent genome-wide association (GWA) studies have identified several novel genetic loci associated with age at menarche and age at natural menopause. However, the stringent significance threshold used in GWA studies potentially led to false negatives and true associations may have been overlooked. Incorporating biologically relevant information, we examined whether common genetic polymorphisms in candidate genes of nine groups of biologically plausible pathways and related phenotypes are associated with age at menarche and age at natural menopause. A total of 18,862 genotyped and imputed single nucleotide polymorphisms (SNPs) in 278 genes were assessed for their associations with these two traits among a total of 24,341 women from the Nurses' Health Study (NHS, N = 2,287) and the Women's Genome Health Study (WGHS, N = 22,054). Linear regression was used to assess the marginal association of each SNP with each phenotype. We adjusted for multiple testing within each gene to identify statistically significant SNP associations at the gene level. To evaluate the overall evidence for an excess of statistically significant gene associations over the proportion expected by chance, we applied a one-sample test of proportion to each group of candidate genes. The steroid-hormone metabolism and biosynthesis pathway was found significantly associated with both age at menarche and age at natural menopause (P = 0.040 and 0.011, respectively). In addition, the group of genes associated with precocious or delayed puberty was found significantly associated with age at menarche (P = 0.013), and the group of genes involved in premature ovarian failure with age at menopause (P = 0.025).

Indexed as

Age of OnsetPolymorphism, Single NucleotideAdolescentAge FactorsChildFemaleGenetic Association StudiesGenetic Predisposition to DiseaseGenotypeGonadal Steroid HormonesHumansLinear ModelsMenarcheMenopauseMiddle AgedNursesGonadal Steroid HormonesSomatomedinsTransforming Growth Factor beta

Identifiers

PMID20734064
PMCPMC2967297
OpenAlexW1988427374

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.