Evidence map›Paper›PMID 20729797›Full record

ArticleMolecules (Basel, Switzerland)2010

Development of a sphingosylphosphorylcholine detection system using RNA aptamers.

Katsunori Horii, Kazuya Omi, Yoshihito Yoshida, Yuka Imai, Nobuya Sakai, Asako Oka, Hiromi Masuda, Makio Furuichi, Tetsuji Tanimoto, Iwao Waga

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.4field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
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  5. Review
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  9. Review
  10. Sphingosylphosphorylcholine in cancer progress.International journal of clinical and experimental medicine · 2015
    Review
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Katsunori HoriiVALWAY Technology Center, NEC Soft, Ltd., Tokyo 136-8627, Japan. horii-katsunori@mxb.nes.nec.co.jp
Kazuya Omi
Yoshihito Yoshida
Yuka Imai
Nobuya Sakai
Asako Oka
Hiromi Masuda
Makio Furuichi
Tetsuji Tanimoto
Iwao Waga
Fujirebio (Japan) · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sphingosylphosphorylcholine (SPC) is a lysosphingolipid that exerts multiple functions, including acting as a spasmogen, as a mitogenic factor for various types of cells, and sometimes as an inflammatory mediator. Currently, liquid chromatography/tandem mass spectrometry (LC/MS/MS) is used for the quantitation of SPC. However, because of the complicated procedures required it may not be cost effective, hampering its regular usage in a routine practical SPC monitoring. In this report, we have generated RNA aptamers that bind to SPC with high affinity using an in vitro selection procedure and developed an enzyme-linked aptamer assay system using the minimized SPC aptamer that can successfully distinguish SPC from the structurally related sphingosine 1-phosphate (S1P). This is the first case of the Systematic Evolution of Ligands by EXponential enrichment (SELEX) process being performed with a lysosphingolipid. The SPC aptamers would be valuable tools for the development of aptamer-based medical diagnosis and for elucidating the biological role of SPC.

Indexed as

Aptamers, NucleotideBase SequenceBiological AssayKineticsMolecular Sequence DataNucleic Acid ConformationPhosphorylcholineReproducibility of ResultsSELEX Aptamer TechniqueSphingosineSurface Plasmon ResonanceAptamers, NucleotidePhosphorylcholineSphingosinesphingosine phosphorylcholine

Identifiers

PMID20729797
PMCPMC6257670
OpenAlexW2148237300

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.