Evidence map›Paper›PMID 20729380›Full record

ArticleThe Plant cell2010

The AP-3 β adaptin mediates the biogenesis and function of lytic vacuoles in Arabidopsis.

Elena Feraru, Tomasz Paciorek, Mugurel I Feraru, Marta Zwiewka, Ruth De Groodt, Riet De Rycke, Jürgen Kleine-Vehn, Jirí Friml

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 140 citations in OpenAlex.

  1. Article
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  3. Cargo Sorting Zones in Plant Trans-Golgi Network.Sub-cellular biochemistry · 2026
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  10. Regulation of PIN-FORMED Protein Degradation.International journal of molecular sciences · 2023
    Review
  11. Article
  12. Article
  13. Review
  14. Review
  15. Review
  16. Review
  17. Review
  18. Article
  19. Tonoplast-localized CaProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  20. Review

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Elena FeraruDepartment of Plant Systems Biology, VIB, 9052 Gent, Belgium.
Tomasz Paciorek
Mugurel I Feraru
Marta Zwiewka
Ruth De Groodt
Riet De Rycke
Jürgen Kleine-Vehn
Jirí Friml
Ghent University · BEVIB-UGent Center for Plant Systems Biology · BEUniversity of Tübingen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant vacuoles are essential multifunctional organelles largely distinct from similar organelles in other eukaryotes. Embryo protein storage vacuoles and the lytic vacuoles that perform a general degradation function are the best characterized, but little is known about the biogenesis and transition between these vacuolar types. Here, we designed a fluorescent marker-based forward genetic screen in Arabidopsis thaliana and identified a protein affected trafficking2 (pat2) mutant, whose lytic vacuoles display altered morphology and accumulation of proteins. Unlike other mutants affecting the vacuole, pat2 is specifically defective in the biogenesis, identity, and function of lytic vacuoles but shows normal sorting of proteins to storage vacuoles. PAT2 encodes a putative β-subunit of adaptor protein complex 3 (AP-3) that can partially complement the corresponding yeast mutant. Manipulations of the putative AP-3 β adaptin functions suggest a plant-specific role for the evolutionarily conserved AP-3 β in mediating lytic vacuole performance and transition of storage into the lytic vacuoles independently of the main prevacuolar compartment-based trafficking route.

Indexed as

Adaptor Protein Complex 3Adaptor Protein Complex beta SubunitsArabidopsisArabidopsis ProteinsCloning, MolecularMutationProtein TransportVacuolesAdaptor Protein Complex 3Adaptor Protein Complex beta SubunitsArabidopsis Proteins

Identifiers

PMID20729380
PMCPMC2947184
OpenAlexW2132195914

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.