Evidence map›Paper›PMID 20729193›Full record

ArticleThe Journal of biological chemistry2010

The role of proline in the membrane re-entrant helix of caveolin-1.

Satoko Aoki, Annick Thomas, Marc Decaffmeyer, Robert Brasseur, Richard M Epand

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 43 citations in OpenAlex.

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  13. Establishing the lipid droplet proteome: Mechanisms of lipid droplet protein targeting and degradation.Biochimica et biophysica acta. Molecular and cell biology of lipids · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Satoko AokiFrom the Department of Biochemistry and Biomedical Sciences, McMaster University Health Science Center, Hamilton, Ontario L8N 3Z5, Canada.
Annick ThomasCentre de Biophysique Moléculaire Numérique, ULg Gembloux Agro-BioTech, Passage des Déportés 2, 5030 Gembloux, Belgium.
Marc DecaffmeyerCentre de Biophysique Moléculaire Numérique, ULg Gembloux Agro-BioTech, Passage des Déportés 2, 5030 Gembloux, Belgium.
Robert BrasseurCentre de Biophysique Moléculaire Numérique, ULg Gembloux Agro-BioTech, Passage des Déportés 2, 5030 Gembloux, Belgium.
Richard M EpandFrom the Department of Biochemistry and Biomedical Sciences, McMaster University Health Science Center, Hamilton, Ontario L8N 3Z5, Canada. Electronic address: epand@mcmaster.ca.
Gembloux Agro-Bio Tech · BEMcMaster University Medical Centre · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Caveolin-1 has a segment of hydrophobic amino acids comprising approximately residues 103-122. We have performed an in silico analysis of the conformational preference of this segment of caveolin-1 using PepLook. We find that there is one main group of stable conformations corresponding to a hydrophobic U bent model that would not traverse the membrane. Furthermore, the calculations predict that substituting the Pro(110) residue with an Ala will change the conformation to a straight hydrophobic helix that would traverse the membrane. We have expressed the P110A mutant of caveolin-1, with a FLAG tag at the N terminus, in HEK 293 cells. We evaluate the topology of the proteins with confocal immunofluorescence microscopy in these cells. We find that FLAG tag at the N terminus of the wild type caveolin-1 is not reactive with antibodies unless the cell membrane is permeabilized with detergent. This indicates that in these cells, the hydrophobic segment of this protein is not transmembrane but takes up a bent conformation, making the protein monotopic. In contrast, the FLAG tag at the N terminus of the P110A mutant is equally exposed to antibodies, before and after membrane permeabilization. We also find that the P110A mutation causes a large reduction of endocytosis of caveolae, cellular lipid accumulation, and lipid droplet formulation. In addition, we find that this mutation markedly reduces the ability of caveolin-1 to form structures with the characteristic morphology of caveolae or to partition into the detergent-resistant membranes of these cells. Thus, the single Pro residue in the membrane-inserting segment of caveolin-1 plays an important role in both the membrane topology and localization of the protein as well as its functions.

Indexed as

Amino Acid SubstitutionAnimalsCaveolaeCaveolin 1Cell LineEndocytosisHumansMiceMutation, MissenseProlineProtein Structure, SecondaryCaveolin 1Proline

Identifiers

PMID20729193
PMCPMC2963397
OpenAlexW2083914866

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.