Evidence map›Paper›PMID 20725992›Full record

ArticleGenes, chromosomes & cancer2010

Mutated KRAS results in overexpression of DUSP4, a MAP-kinase phosphatase, and SMYD3, a histone methyltransferase, in rectal carcinomas.

Jochen Gaedcke, Marian Grade, Klaus Jung, Jordi Camps, Peter Jo, Georg Emons, Anastasia Gehoff, Ulrich Sax, Markus Schirmer, Heinz Becker and 3 more

Open access · greenAbstract readValidation Study
In one paragraph

Article in Genes, chromosomes & cancer, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 131 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
131citing papers in PubMed, 2 pooled it
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

131 citing papers in PubMed, 2 syntheses or guidelines pooled it, 191 citations in OpenAlex.

  1. Pooled it
  2. Knockdown of TCTN1 Strongly Decreases Growth of Human Colon Cancer Cells.Medical science monitor : international medical journal of experimental and clinical research · 2017
    Pooled it
  3. Trial
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  6. Genes & diseases · 2025
    Article
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  19. Dual-specificity phosphatases: therapeutic targets in cancer therapy resistance.Journal of cancer research and clinical oncology · 2022
    Review
  20. Ferroptosis-Related GeneFrontiers in cell and developmental biology · 2022
    Article

71 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 2 countries.

Jochen GaedckeDepartment of General and Visceral Surgery, University Medicine, Göttingen, Germany.
Marian Grade
Klaus Jung
Jordi Camps
Peter Jo
Georg Emons
Anastasia Gehoff
Ulrich Sax
Markus Schirmer
Heinz Becker
Tim Beissbarth
Thomas Ried
B Michael Ghadimi
Center for Cancer Research · USUniversitätsmedizin Göttingen · DEUniversity of Göttingen · DE

Funding

Identification and functional characterization of colorectal cancer genesZIABC010833 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI RIED, THOMAS · 2009 to 2022
$12.1M
Prediction of Therapy Response in Colorectal CancerZIABC010837 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI RIED, THOMAS · 2009 to 2022
$8.9M
Consequences of Genomic Instability and Aneuploidy on the Colorectal Cancer TranZIABC010835 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI RIED, THOMAS · 2009 to 2016
$6.8M
Identification and functional characterization of colorectal cancer genesZ01BC010833 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI RIED, THOMAS · 2007 to 2008
$1.5M
Intramural NIH HHS Z01 BC010833
6 · The paper itself

Abstract

Mutations of the KRAS oncogene are predictive for resistance to treatment with antibodies against the epithelial growth factor receptor in patients with colorectal cancer. Overcoming this therapeutic dilemma could potentially be achieved by the introduction of drugs that inhibit signaling pathways that are activated by KRAS mutations. To identify comprehensively such signaling pathways, we profiled pretreatment biopsies and normal mucosa from 65 patients with locally advanced rectal cancer-30 of which carried mutated KRAS-using global gene expression microarrays. By comparing all tumor tissues exclusively to matched normal mucosa, we could improve assay sensitivity, and identified a total of 22,297 features that were differentially expressed (adjusted P-value <0.05) between normal mucosa and cancer, including several novel potential rectal cancer genes. We then used this comprehensive description of the rectal cancer transcriptome as the baseline for identifying KRAS-dependent alterations. The presence of activating KRAS mutations is significantly correlated to an upregulation of 13 genes (adjusted P-value <0.05), among them DUSP4, a MAP-kinase phosphatase, and SMYD3, a histone methyltransferase. Inhibition of the expression of both genes has previously been shown using the MEK1-inhibitor PD98059 and the antibacterial compound Novobiocin, respectively. These findings suggest a potential approach to overcome resistance to treatment with antibodies against the epithelial growth factor receptor in patients with KRAS-mutant rectal carcinomas.

Indexed as

Genes, rasBiopsyDual-Specificity PhosphatasesGene Expression ProfilingHistone-Lysine N-MethyltransferaseHumansMitogen-Activated Protein Kinase PhosphatasesMutationPolymerase Chain ReactionRectal NeoplasmsSignal TransductionUp-RegulationDual-Specificity PhosphatasesDUSP4 protein, humanHistone-Lysine N-MethyltransferaseMitogen-Activated Protein Kinase PhosphatasesSMYD3 protein, human

Identifiers

PMID20725992
PMCPMC3535184
OpenAlexW2040426919

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.