Evidence map›Paper›PMID 20725633›Full record

ArticleFrontiers in computational neuroscience2010

History-dependent Dynamics in a Generic Model of Ion Channels - an Analytic Study.

Daniel Soudry, Ron Meir

Abstract read
In one paragraph

Article in Frontiers in computational neuroscience, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Microcanonical coarse-graining of the kinetic Ising model.The Journal of chemical physics · 2020
    Article
  2. Dynamical Timescale Explains Marginal Stability in Excitability Dynamics.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2017
    Article
  3. Article
  4. Article
  5. Entrainment of the intrinsic dynamics of single isolated neurons by natural-like input.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2013
    Article
  6. Article
  7. Conductance-based neuron models and the slow dynamics of excitability.Frontiers in computational neuroscience · 2012
    Article
  8. Stochastic differential equation models for ion channel noise in Hodgkin-Huxley neurons.Physical review. E, Statistical, nonlinear, and soft matter physics · 2011
    Article
  9. Dynamics of excitability over extended timescales in cultured cortical neurons.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2010
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Daniel SoudryDepartment of Electrical Engineering, Technion Haifa, Israel.
Ron Meir

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recent experiments have demonstrated that the timescale of adaptation of single neurons and ion channel populations to stimuli slows down as the length of stimulation increases; in fact, no upper bound on temporal timescales seems to exist in such systems. Furthermore, patch clamp experiments on single ion channels have hinted at the existence of large, mostly unobservable, inactivation state spaces within a single ion channel. This raises the question of the relation between this multitude of inactivation states and the observed behavior. In this work we propose a minimal model for ion channel dynamics which does not assume any specific structure of the inactivation state space. The model is simple enough to render an analytical study possible. This leads to a clear and concise explanation of the experimentally observed exponential history-dependent relaxation in sodium channels in a voltage clamp setting, and shows that their recovery rate from slow inactivation must be voltage dependent. Furthermore, we predict that history-dependent relaxation cannot be created by overly sparse spiking activity. While the model was created with ion channel populations in mind, its simplicity and genericalness render it a good starting point for modeling similar effects in other systems, and for scaling up to higher levels such as single neurons which are also known to exhibit multiple time scales.

Indexed as

history-dependenceion channelsmultiple timescalesnon-Markovrenewal theorysemi-Markovslow inactivation

Identifiers

PMID20725633
PMCPMC2916672

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.